Gurdon Institute Xenopus laevis EST Database

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 Related Clusters

         CS%  VC Transcript                               Size Type    Links    % In    % Out     Identified Blast Description.
     1   2.0    0Xl3.1-IMAGE:8638510.5                       4 END     1          33       25                (no blast hit)

         CS%  VC Transcript                               Size Type    Percent  From       To     Identified Blast Description.
     2   0.0    0Xl3.1-IMAGE:6950434.3                      48 PI      92          2      981                (no blast hit)
     3   0.0    0Xl3.1-IMAGE:8638510.5                       4 PI      92        265     1017                (no blast hit)

 This cluster: approximate FL confidence score = 0%

 1012780238 Xl3.1-IMAGE:8531571.5 - 3 ESTs
                                                                       0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980.......990.......1000......1010......1020......1030......1040......1050......1060......1070......1080......1090.
 ?   ?   ?    ?    ?     ?    ?   ? 
                                                 Xl3.1-IMAGE:8531571.5 ATTTGGAAGAGGAGCTGGTGGCTTTGAAGGCATCCTGGCCACCAATGAAAAGCATACCATGCAAAACCTTAATGACCGCTTAGCCAGTTACTTGGATAAAGTTAAGGCTTTGGAAAAGGATAATACTGATCTTGAGACGAAAATACGAGAATGGTATGAAAAACTTCGTCCAGCATCTGGTGGTGTAGGAACAGCGGACTACAGTAAATACTACCCAATTATTGAAGAACTCAAGAAAAAGATCATGGACAGCACTTTGGAAAATGCCAGGATCCTCTTACAGACTGACAATGCCCGGCTGGCGGCTGATGACTTCAGGCTGAAGTATGAGAACGAGCTGGCCCTTCGCCAGAGCGTGGAAGCTGATATTAATGGCCTACGTAGAGTGCTCGATGAGTTGACCCTGTGCAAGGCTGATCTGGAATTGCAGATTGAAAGCTTGACAGAGGAACTGGCGTATCTGAAGAAAAATCATAAGGAGGAATTGGATGCTCTCCAAGGTGGACCTGCTGGCCAGCTCACTGTTGAGATGAATGCTGCTCCAGGAACCGACCTGACCAAGTTACTCAATGACATGAGAGAACAATATGAAACCCTTGCTGAGAAGAACAGAAGAGAAGCTGAGAGAGCATTTAATGAGCAGAGCAAAGAAATAAAGAAAGAGATCCAAGCTGGAGTGCAGCAAGTACAGTCTAACACTACAGAGATTTCAGATCTGAAACGGACACTTCAGGGATTGGAGATAGAACTTAATGCACAGATGGCAATGAAACAATCGTTAGAGAAAACCCTGGCAGAGACAGAAGGACGCTTTTGTTCTCAGCTTGGGCAGTTACAAAACTTAATCACCAGTGTGGAGGAGCAGTTGGTCCAACTGAGAAGTGACATGGAGCTTCAGAGCAATGAGTACAAACAGCTGCTGGACACTCAGACCCGGTTAGAGACAGAGATAGAGACATATCGCAAATTGCTGGAAGGAGAAGGGGAGCAGAGCTCGCTGGATGTCGATGCTCTTTCGAACCTAAACTATTTCTACAGACAAACGCTTAACTTATATTGAAAGTGTGATGGAAGTGATTCAAGTGCAGAAGT
                                                  Xl3.1-CHK-1012714326       AAGAGGAGCTGGTGGCTTTGAAGGCATCCTGGCCACCAATGAAAAGCATACCATGCAAAACCTTAATGACCGCTTAGCCAGTTACTTGGATAAAGTTAAGGCTTTGGAAAAGGATAATACTGATCTTGAGACGAAAATACGAGAATGGTATGAAAAACTTCGTCCAGCATCTGGTGGTGTAGGAACAGCGGACTACAGTAAATACTACCCAATTATTGAAGAACTCAAGAAAAAGATCATGGACAGCACTTTGGAAAATGCCAGGATCCTCTTACAGACTGACAATGCCCGGCTGGCGGCTGATGACTTCAGGCTGAAGTATGAGAACGAGCTGGCCCTTCGCCAGAGCGTGGAAGCTGATATTAATGGCCTACGTAGAGTGCTCGATGAGTTGACCCTGTGCAAGGCTGATCTGGAATTGCAGATTGAAAGCTTGACAGAGGAACTGGCGTATCTGAAGAAAAATCATAAGGAGGAATTGGATGCTCTCCAAGGTGGACCTGCTGGCCAGCTCACTGTTGAGATGAATGCTGCTCCAGGAACCGACCTGACCAAGTTACTCAATGACATGAGAGAACAATATGAAACCCTTGCTGAGAAGAACAGAAGAGAAGCTGAGAGAGCATTTAATGAGCAGAGCAAAGAAATAAAGAAAGAGATCCAAGCTGGAGTGCAGCAAGTACAGTCTAACACTACAGAGATTTCAGATCTGAAACGGACACTTCAGGGATTGGAGATAGAACTTAATGCACAGATGGCAATGAAACAATCGTTAGAGAAAACCCTGGCAGAGACAGAAGGACGCTTTTGTTCTCAGCTTGGGCAGTTACAAAACTTAATCACCAGTGTGGAGGAGCAGTTGGTCCAACTGAGAAGTGACATGGAGCTTCAGAGCAATGAGTACAAACAGCTGCTGGACACTCAGACCCGGTTAGAGACAGAGATAGAGACATATCGCAAATTGCTGGAAGGxxxxxxGGAGCAxxGCTCGCTGGATGTCGATGCTCTxxxxAACCTAAACxAxxTCTACAGACAAACGCTTAACTTATATTGAAAGTGTGATGGAAGTGATTCAAGTGC
                                                      consensus depths      1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     2     2     2     2     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     1     2     1     2     1     2     1     2     1     2     1     2     1     2     1     2     1     2     1     2     1     2     1     2     1     2     1     2     1     1     1     1     1     1     1     1
                                               BLH MIN      16     128 
  5   1   2      seed Lmb1      out                   IMAGE:8531571.5p ATTTGGAAGAGGAGCTGGTGGCTTTGAAGGCATCCTGGCCACCAATGAAAAGCATACCATGCAAAACCTTAATGACCGCTTAGCCAGTTACTTGGATAAAGTTAAGGCTTTGGAAAAGGATAATACTGATCTTGAGACGAAAATACGAGAATGGTATGAAAAACTTCGTCCAGCATCTGGTGGTGTAGGAACAGCGGACTACAGTAAATACTACCCAATTATTGAAGAACTCAAGAAAAAGATCATGGACAGCACTTTGGAAAATGCCAGGATCCTCTTACAGACTGACAATGCCCGGCTGGCGGCTGATGACTTCAGGCTGAAGTATGAGAATGAGCTGGCCCTTCGCCAGAGCGTGGAAGCTGATATTAATGGCCTACGTAGAGTGCTCGATGAGTTGACCCTGTGCAAGGCTGATCTGGAATTGCAGATTGAAAGCTTGACAGAGGAACTGGCGTATCTGAAGAAAAATCATAAGGAGGAATTGGATGCTCTCCAAGGTGGACCTGCCGGCCAGCTCACTGTTGAGATGAATGCTGCTCCAGGAACCGACCTAACCAAGTTACTCAATGACATGAGAGAACAATATGAAACCCTTGCTGAGAAGAACAGAAGAGAAGCTGAGAGAGCATTTAATGAGCAGAGCAAAGAAANTAAGAAAGAGATCCAAGCTGGAGTGCAGCAAGTACAGTCTAACACTACAGAGATTTCAGATCTGAAACGGACC
  5   1   2       bld Lmb1                            IMAGE:8534537.5p                                                                                                                                                                                                                                                           CGCACTTTGGAAAATTCCAGGATCCTCTTACAGACTGACAATGCCCGGCTGGCGGCTGATGACTTCAGGCTGAAGTATGAGAACGAGCTGGCCCTTCGCCAGAGCGTGGAAGCTGATATTAATGGCCTACGTAGAGTGCTCGATGAGTTGACCCTGTGCAAGGCTGATCTGGAATTGCAGATTGAAAGCTTGACAGAGGAACTGGCGTATCTGAAGAAAAATCATAAGGAGGAATTGGATGCTCTCCAAGGTGGACCTGCTGGCCAGCTCACTGTTGAGATGAATGCTGCTCCAGGAACCGACCTGACCAAGTTACTCAATGACATGAGAGAACAATATGAAACCCTTGCTGAGAAGAACAGAAGAGAAGCTGAGAGAGCATTTAATGAGCAGAGCAAAGAAATAAAGAAAGAGATCCAAGCTGGAGTGCAGCAAGTACAGTCTAACACTACAGAGATTTCAGATCTGAAACGGACACTTCAGGGATTGGAGATAGAACTTAATGCACAGATGGCAATGAAACAATCGTTAGAGAAAACCCTGGCAGAGACAGAAGGACGCTTTTGTTCTCAGCTTGGGCAGTTACAAAACTTAATCACCAGTGTGGAGGAGCAGTTGGTCCACTGAGAATGACATGGAGCTTCAGAGCATGAGTACAACAGCTGCTGGACTTCAGACCCGTTAGAGCAGAGATAAGACTATCGCAATTGCTGAGGAAAGGAGATACTGCTCCTGGAGCAGAGCTCTTCAATTTCAAGATCTCCGAAAAACCTAAACTATTTGAAAGGGGGAGAAAGATC
  5   1   2       bld Lmb2                            IMAGE:8638799.5p                                                                                                                                                                                                                                                                                ATCCTCTTACAGACTGACAATGCCCGGCTGGCGGCTGATGACTTCAGGCTGAAGTATGAGAACGAGCTGGCCCTTCGCCAGAGCGTGGAAGCTGATATTAATGGCCTACGTAGAGTGCTCGATGAGTTGACCCTGTGCAAGGCTGATCTGGAATTGCAGATTGAAAGCTTGACAGAGGAACTGGCGTATCTGAAGAAAAATCATAAGGAGGAATTGGATGCTCTCCAAGGTGGACCTGCTGGCCAGCTCACTGTTGAGATGAATGCTGCTCCAGGAACCGACCTGACCAAGTTACTCAATGACATGAGAGAACAATATGAAACCCTTGCTGAGAAGAACAGAAGAGAAGCTGAGAGAGCATTTAATGAGCAGAGCAAAGAAATAAAGAAAGAGATCCCAGCTGGAGTGCAGCAAGTACAGTCTAACACTACAGAGATTTCAGATCTGAAACGGACACTTCAGGGATTGGAGATAGAACTTAATGCACAGATGGCAATGAAACAATCGTTAGAGAAAACCCTGGCAGAGACAGAAGGACGCTTTTGTTCTCAGCTTGGGCAGTTACAAAACTTAATCACCAGTGTGGAGGAGCAGTTGGTCCAACTGAGAAGTGACATGGAGCTTCAGAGCAATGAGTACAAACAGCTGCTGGACACTCAGACCCGGTTAGAGACAGAGATAGAGACATATCGCAAATTGCTGGAAGGAGAAGGANGAAACTGCTCGCTGGATGTCGATGCTCTTTCGAATTTTNCCAAGATCTACAGACAAACGCTTAACTTATATTGAAAGTGTGATGGAAGTGATTCAAGTGCAGAAGTGAG

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