Gurdon Institute Xenopus laevis EST Database
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Application in use by Guest User - 25 Jun 2022 - database INFO-PUBLIC
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By Clone or Sequence Name
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Related Clusters
CS% VC Transcript Size Type Links % In % Out Identified Blast Description.
1 2.0 0Xl3.1-XL077a12.3.5 12 END 2 40 16 (no blast hit)
This cluster: approximate FL confidence score = 0%
1012790646 Xl3.1-XL103i21.5 - 5 ESTs
-70.......-60.......-50.......-40.......-30.......-20.......-10.......0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980.......990.......1000......1010......1020......1030......1040......1050......1060......1070......1080......1090......1100......1110......1120......1130......1140......1150......1160..
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Xl3.1-XL103i21.5 GCGGCCTTTACAAACCTGTGCAGTGCCACCAGTCCACTGGATATTGTTGGTGTGTCTTAGTAGACACTGGTCGTCCATTGCCTGGAACATCTACACGTTATGAAACTCCTGTGTGCGAAAGTGATGCCAGATGGAAAAATACGGACGCTGAAGACCCATTTAAAGACAGAGAATTAGCAGGTTGTCCAGAAGGAAAGAAGCTGGAATTCATCACCAGTTTATTGGACGCTCTCACCACGGACATGGTGCAAGCCATCAACTCAGCAGCGCCGGCCGCAGGCGGGAGATTCTCAGAGCCAGATCCCAATCACACACTGGAGGAAAGAGTGGTCCTTTGGTACTTCAGCCAGTTAGACAGCAACGCCAGTGAGGACATAAATAAGAAGGAGATGAAGCCCTTCAAAAGATACGTAAAAAAGAAAGCCAAACCCAAGAAATGTGCCCGGCGTTTCACTGACTACTGTGATCTTAATAAGGACAAATCCATTTCATTTCCAGAGCTTAAAGGCTGTCTAGGAGTCCGCAAGGAACCAGGTGCAAATGCTGGAAGTTTCCCTCCTGGAAAGCGGCCCGGCTCTAACCCCTTCAGTCGCCTTGCGTAGGAGAGCCGGCCAGAAGAAGGAGACAGAGAGAAGAGAGGGATGCTGTGGGCGCAGTTGCCGGAGCCACCGATGGGTCGCACAATGTTTGCACTTTTGAGTGAACTTT
Xl3.1-CHK-1012704447 TTTACAAACCTGTGCAGTGCCACCAGTCCACTGGATATTGTTGGTGTGTCTTAGTAGACACTGGTCGTCCATTGCCTGGAACATCTACACGTTATGAAACTCCTGTGTGCGAAAGTGATGCCAGATGGAAAAATACGGACGCTGAAGACCCATTTAAAGACAGAGAATTAGCAGGTTGTCCAGAAGGAAAGAAGCTGGAATTCATCACCAGTTTATTGGACGCTCTCACCACGGACATGGTGCAAGCCATCAACTCAGCAGCGCCGGCCGCAGGCGGGAGATTCTCAGAGCCAGATCCCAATCACACACTGGAGGAAAGAGTGGTCCTTTGGTACTTCAGCCAGTTAGACAGCAACGCCAGTGAGGACATAAATAAGAAGGAGATGAAGCCCTTCAAAAGATACGTAAAAAAGAAAGCCAAACCCAAGAAATGTGCCCGGCGTTTCACTGACTACTGTGATCTTAATAAGGACAAATCCATTTCATTTCCAGAGCTTAAAGGCTGTCTAGGAGTCCGCAAGGAACCAGGTGCAAATGCTGGAAGTTTCCCTCCTGGAAAGCGGCCCGGCTCTAACCCCTTCAGTCGCCTTGCGTAGGAGAGCCGGCCAGAAGAAGGAGACAGAGAGAAGAGAGGGATGCTGTGGGCGCAGTTGCxGxxxCCACCGATGGGTCGCACAATGTTTGCACTTTTGAGTGAACTTTATTCAT
consensus depths 2 2 2 2 2 2 2 2 2 2 2 2 3 3 3 3 3 3 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4 3 4 3 4 2 4 2 4 2 4 2 4 2 4 2 4 2 4 2 4 2 4 1 4 2 2 2 2 2 2
5 1 2 bld FaB out IMAGE:8071095.5p GCGACAAAGTGCTCTGGAGGAAGCAAACTGAACCCGAGAGAGGGAATTGTGATTCCAGAATGTGCCCCAGGCGGCCTTTACAAACCTGTGCAGTGCCACCAGTCCACTGGATATTGTTGGTGTGTCTTAGTAGACACTGGTCGTCCATTGCCTGGAACATCTACACGTTATGAAACTCCTGTGTGCGAAAGTGATGCCAGATGGAAAAATACGGACGCTGAAGACCCATTTAAAGACAGAGAATTAGCAGGTTGTCCAGAAGGAAAGAAGCTGGAATTCATCACCAGTTTATTGGACGCTCTCACCACGGACATGGTGCAAGCCATCAACTCAGCAGCGCCGGCCGCAGGCGGGAGATTCTCAGAGCCAGATCCCAATCACACACTGGAGGAAAGAGTGGTCCTTTGGTACTTCAGCCAGTTAGACAGCAACGCCAGTGAGGACATAAATAAGAAGGAGATGAAGCCCTTCAAAAGATACGTAAAAAAGAAAGCCAAACCCAAGAAATGTGCCCGGCGTTTCACTGACTACTGTGATCTTAATAAGGACAAATCCATTTCATTTCCAGAGCTTAAAGGCTGTCTAGGAGTCCGCAAGGAACCAGGTGCNAATGCTGGAAGTTTCCTCCTGGAAGCGGCCGGCTCTACCCCTTCATCGCCTGCGTAGAGAGCCGGCCAAAGAAGAACAGANAGAGAGAGCTGCTGTGGCGCAGTGCATGCTCGATGATCCACATGTTGCACTTGATGACTTA
5 1 2 seed Tbd7 out XL103i21.5p GCGGCCTTTACAAACCTGTGCAGTGCCACCAGTCCACTGGATATTGTTGGTGTGTCTTAGTAGACACTGGTCGTCCATTGCCTGGAACATCTACACGTTATGAAACTCCTGTGTGCGAAAGTGATGCCAGATGGAAAAATACGGACGCTGAAGACCCATTTAAAGACAGAGAATTAGCAGGTTGTCCAGAAGGAAAGAAGCTGGAATTCATCACCAGTTTATTGGACGCTCTCACCACGGACATGGTGCAAGCCATCAACTCAGCAGCGCCGGCCGCAGGCGGGAGATTCTCAGAGCCAGATCCCAATCACACACTGGAGGAAAGAGTGGTCCTTTGGTACTTCAGCCAGTTAGACAGCAACGCCAGTGAGGACATAAACAAGAAGGAGATGAAGCCCTTCAAAAGATACGTAAAAAAGAAAGCCAAACCCAAGAAATGTGCCCGGCGTTTCACTGACTACTGTGATCTTAATAAGGACAAATCCATTTCATTTCCAGAGCTTAAAGGCTGTCTAGGAGTCCGCAAGGAACCAGGTGCAAATGCTGGAAGTTTCCCTCCTGGAAAGCGGCCCGGCTCTAACCCCTTCAGTCGCCTTGCGTAGgagagccggccagaagaaggagacagagagaagagagGCATGCTGTGGGCGCAGTTGCAGTGCCTNCGATGGATCT
5 1 2 bld Emb3 IMAGE:3399690-IMAGp.IMAGp AGACACTGGTCGTCCATTGCCTGGAACATCTACACGTTATGAAACTCCTGTGTGCGAAAGTGATGCCAGATGGAAAAATACGGACGCTGAAGACCCATTTAAAGACAGAGAATTAGCAGGTTGTCCAGAAGGAAAGAAGCTGGAATTCATCACCAGTTTATTGGACGCTCTCACCACGGACATGGTGCAAGCCATCAACTCAGCAGCGCCGGCCGCAGGCGGGAGATTCTCAGAGCCAGATCCCAATCACACACTGGAGGAAAGAGTGGTCCTTTGGTACTTCAGCCAGTTAGACAGCAACGCCAGTGAGGACATAAATAAGAAGGAGATGAAGCCCTTCAAAAGATACGTAAAAAAGAAAGCCAAACCCAAGAAATGTGCCCGGCGTTTCACTGACTACTGTGATCTTAATAAGGACAAATCCATTTCATTTCCAGAGCTTAAAGGCTGTCTAGGAGTCCGCAAGGAACCAGGTGCAAATGCTGGAAGTTTCCCTCCTGGAAAGCGGCCCGGCTCTAACCCCTTCAGTCGCCTTGCGTAGGAGAGCCGGCcagaagaaggagacagagagaagagagGGATGCTGTGGGCGCAGTTGCAGTGCCTCCCGATGGATCTCACAATGTTTGCACTTTTGAGTGAACTTTATTCATAAGGCttttttttgttttgtttCTTTATGTTCCATTATCTGAATGGAAATGAGAAGAAAATGTTGCTTCttttttttttt
5 1 2 bld Emb3 IMAGE:3399641-IMAGp.IMAGp TGAAACTCCTGTGTGCGAAAGTGATGCCAGATGGAAAAATACGGACGCTGAAGACCCCTTTAAAGACAGAGAATTAGCAGGTTGTCCAGAAGGAAAGAAGCTGGAATTCATCACCAGTTTATTGGACGCTCTCACCACGGACATGGTGCAAGCCATCAACTCAGCAGCGCCGGCCGCAGGCGGGAGA
5 1 1 add Brn3 IMAGE:8539686.5p CCGCAAGGAACCAGGTACAAATTTCCCTCTTGGAAAGAGGCCCGGCTCTAACCCCTTCAGTCGCCTTATGTAGGAGAGTCGGGGAGAAGCAGTCGCACACGATACCAAGGAGACGAGAGAGAAGAGCGGAATGATCTGGGCGCAGTCGCGGAGCCACCGATGGGTCGCACAATGTTTGCACTTTTGAGTGAACTTTATTCATAAGGtttttttttATGTTCCATTATCTGAATGGAAATGAGAAGAAAATGTTGCttttttgtttttttaagatggtttttataaaaaaaaaTCTGCTACTGACAAATAGGAATTGAACTTGTGACTGAGGGGAAATGGAGTGTCTGTATATAAATGTATATGTGAATTGTACAGTCCCTTTGTACAGGATTTCAGTGACTTATAGATCACAACCCATTCtttttttttttGCTGCTTTGCCTCCTAATGAAATGTCACTAATGTATTTGTATCTGTTCCTTTCATGTGGGTTTTATTAAAGGGGAACTCCGACTTCCAAACCAAAATATAATAAAGAGGCCACATAACACACAAACCCCTAATATACCCATCAGAGTTACCTGTTTCTACAAAAAGTCTGAATAAAAGCCATTTTCTATGCTGaaaaaaaaaaaaaaaaaaaaaaaaaaaaGG
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