Gurdon Institute Xenopus laevis EST Database

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 Related Clusters

         CS%  VC Transcript                               Size Type    Links    % In    % Out     Identified Blast Description.
     1   1.0    0Xl3.1-IMAGE:4958923.5                       2 END     1          25       50                NF-protocadherin [Xenopus laevis]

 This cluster: approximate FL confidence score = 0%

 1012795313 Xl3.1-IMAGE:7982725.5 - 4 ESTs
                                                                       0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980.......990.......1000......1010......1020......1030......1040......1050......1060......1070.
 ?   ?   ?    ?    ?     ?    ?   ? 
                                                 Xl3.1-IMAGE:7982725.5 CCTGGAGCCTCCTATGGACGGGATCTTCTCCATTCACCCCGACACCGGCGATATCACAGTCAATATCATCCTGGACCGGGAGCAGACGGACAGGTACGAGTTCAGAGTTGACCGTCAAGACAAGGGCATCCCCGTTCTGCAGGGGGCGACCTCGGTGGCGGTGCGAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCCGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCTGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAACACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCCAGATCAGCCACAGCCACCGTGTCCCTGTTTGTCATGGATGAGAACGACAATGCCCCTTCCATTAGTTTCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACTGTGGTGGCTTCTGTAGTGGCAACCGACAGTGACAATGGGGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTTTAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTATGGGCTGCACCGGCTAGTAGTGCAAGTGAATGATAGCGGGCAACCCCCCCAGTCGACAATAGCCCTGGTGCACGTGTTCGTCAATGAAACCATCTCCAATGCCACAGTGGTCGACTTCCAAATTGCCAGAAGTTTGCATACCCCATTAACCCAGGATATCGCTGGAGACCCCAGCTATGACATGAGCAAGCAGAGACTGAGCATAGTCATAGGAGTGGTGGCTGGCATCATGACTGTCATTCTGATCATACTGGTGGTGGTCATGGCCCGTTACTGTCGTGCCAAAAGCAAGAATGGCTACGAAGCCGGCAAAAAGGACCACGAGGACTTCTTCACCCCCCAGCAGCACGA
                                                  Xl3.1-CHK-1012708339       GCCTCCTATGGACGGGATCTTCTCCATTCACCCCGACACCGGCGATATCACAGTCAATATCATCCTGGACCGGGAGCAGACGGACAGGTACGAGTTxxxxxxTGACCGTCAAGACAAGGGCATCCCCGTTCTGCAGGGGGCGACCTCGGTGGCGGTGCGAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCCGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCTGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAACACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCCAGATCAGCCACAGCCACCGTGTCCCTGTTTGTCATGGATGAGAACGACAATGCCCCTTCCATTAGTTTCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACTGTGGTGGCTTCTGTAGTGGCAACCGACAGTGACAATGGGGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTTTAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTATGGGCTGCACCGACTAGTAGTGCAAGTGAATGATAGCGGGCAACCCCCCCAGTCGACAATAGCCCTGGTGCACGTGTTCGTCAATGAAACCATCTCCAATGCCACAGTGGTCGACTTCCAAATTGCCAGAAGTTTGCATACCCCATTAACCCAGGATATCGCTGGAGACCCCAGCTATGACATGAGCAAGCAGAGACTGAGCATAGTCATAGGAGTGGTGGCTGGCATCATGACTGTCATTCTGATCATACTGGTGGTGGTCATGGCCCGTTACTGTCGTGCCAAAAGCAAGAATGGCTACGAAGCCGGCAAAAAGGACCACGAGGACTTCTTCACCCCCCAGCAGCACGATAAGTC
                                                      consensus depths      1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     2     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     4     4     4     4     4     4     4     4     4     4     4     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     2     4     2     4     1     3     2     3     2     3     2     2     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1
                                               BLH MIN      15     193 
  5   1   1       add Emb9      out                   IMAGE:7976096.5p CCTGGAGCCTCCTATGGACGGGATCTTCTCCATTCACCCCGACACCGGCGATATCACAGTCAATATCATCCTGGACCGGGAGCAGACGGACAGGTACGAGTTCAGAGTGGTCGCCAAAGACAAGGGCATCCCCGTCCTGCAGGGGGCGACCTCAGTGGTGGTGCAAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCAGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCAGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAGCACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCAAGATCAGCCACTGCCACCGTGTCCCTGTTTGTGATGGATGAGAATGACAATGCCCCTTCCATTAGTATCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACGGTGGTGGCCTCAGTAGTGGCAACCGACAGTGACAATGGAGTCAATGCTGATCTCACTACAGCATCGTAGGGGGGATCCCCTAAAGCTCTTCGAAATGACTCCCCCACGGAGTGGTTCTTTGGTTGCAACTCACCTTAAGCTTATGGCTGCACAATATAGTGCAGTGATGAACTGGCACCCTCAGTCACAAACCTGGTGCCTTTTCTCAGAACCTTCAAGCCATGGCACTCAATGCAGATTCTACCTTACAGATTCTGGCACCTTAATA
  5   1   2      seed Em10                            IMAGE:7982725.5p                                                                                                  CAACAACTCCCTGACCGTCAAGACAAGGGCATCCCCGTTCTGCAGGGGGCGACCTCGGTGGCGGTGCGAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCCGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCTGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAACACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCCAGATCAGCCACAGCCACCGTGTCCCTGTTTGTCATGGATGAGAACGACAATGCCCCTTCCATTAGTTTCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACTGTGGTGGCTTCTGTAGTGGCAACCGACAGTGACAATGGGGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTTTAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTATGGGCTGCACCGGCTAGTAGTGCAAGTGGATGATAGCGGGCAACCCCCCCAGTCTACAGTAGCCCTGGTGCACGTGTTCCGTCATGAAACCATCTCCAACGCCACCGTGTTCGATTTCCCAATTGC
  5   1   2       bld Em10                            IMAGE:8318992.5p                                                                                                   CACAACTCCCTGACCGTCAAGACAAGGGCATCCCCGTTCTGCAGGGGGCGACCTCGGTGGCGGTGCGAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCCGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCTGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAACACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCCAGATCAGCCACAGCCACCGTGTCCCTGTTTGTCATGGATGAGAACGACAATGCCCCTTCCATTAGTTTCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACTGTGGTGGCTTCTGTAGTGGCAACCGACAGTGACAATGGGGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTTTAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTAGGGGCTGCACCGGCTATTAGTGCAAGTGAATGATAGCGGGCAACCCCCCCAGTCTCAGTAACCCTGGGGCACGTGTTCTTCAATGA
  3   1   1       add Emb4      out                   IMAGE:4958923.3p                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACGGTGGTGGCCTCAGTAGTGGCAACCGACAGTGACAATGGAGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTATAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTATGGGCTGCACCGACTAGTAGTGCAAGTGAATGATAGCGGGCAACCCCCCCAGTCGACAATAGCCCTGGTGCACGTGTTCGTCAATGAAACCATCTCCAATGCCACAGTGGTCGACTTCCAAATTGCCAGAAGTTTGCATACCCCATTAACCCAGGATATCGCTGGAGACCCCAGCTATGACATGAGCAAGCAGAGACTGAGCATAGTCATAGGAGTGGTGGCTGGCATCATGACTGTCATTCTGATCATACTGGTGGTGGTCATGGCCCGTTACTGTCGTGCCAAAAGCAAGAATGGCTACGAAGCCGGCAAAAAGGACCACGAGGACTTCTTCACCCCCCAGCAGCACGATAAGTCT

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