Gurdon Institute Xenopus laevis EST Database
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Application in use by Guest User - 08 Aug 2022 - database INFO-PUBLIC
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By Clone or Sequence Name
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Related Clusters
CS% VC Transcript Size Type Links % In % Out Identified Blast Description.
1 1.0 0Xl3.1-IMAGE:4958923.5 2 END 1 25 50 NF-protocadherin [Xenopus laevis]
This cluster: approximate FL confidence score = 0%
1012795313 Xl3.1-IMAGE:7982725.5 - 4 ESTs
0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980.......990.......1000......1010......1020......1030......1040......1050......1060......1070.
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Xl3.1-IMAGE:7982725.5 CCTGGAGCCTCCTATGGACGGGATCTTCTCCATTCACCCCGACACCGGCGATATCACAGTCAATATCATCCTGGACCGGGAGCAGACGGACAGGTACGAGTTCAGAGTTGACCGTCAAGACAAGGGCATCCCCGTTCTGCAGGGGGCGACCTCGGTGGCGGTGCGAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCCGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCTGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAACACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCCAGATCAGCCACAGCCACCGTGTCCCTGTTTGTCATGGATGAGAACGACAATGCCCCTTCCATTAGTTTCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACTGTGGTGGCTTCTGTAGTGGCAACCGACAGTGACAATGGGGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTTTAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTATGGGCTGCACCGGCTAGTAGTGCAAGTGAATGATAGCGGGCAACCCCCCCAGTCGACAATAGCCCTGGTGCACGTGTTCGTCAATGAAACCATCTCCAATGCCACAGTGGTCGACTTCCAAATTGCCAGAAGTTTGCATACCCCATTAACCCAGGATATCGCTGGAGACCCCAGCTATGACATGAGCAAGCAGAGACTGAGCATAGTCATAGGAGTGGTGGCTGGCATCATGACTGTCATTCTGATCATACTGGTGGTGGTCATGGCCCGTTACTGTCGTGCCAAAAGCAAGAATGGCTACGAAGCCGGCAAAAAGGACCACGAGGACTTCTTCACCCCCCAGCAGCACGA
Xl3.1-CHK-1012708339 GCCTCCTATGGACGGGATCTTCTCCATTCACCCCGACACCGGCGATATCACAGTCAATATCATCCTGGACCGGGAGCAGACGGACAGGTACGAGTTxxxxxxTGACCGTCAAGACAAGGGCATCCCCGTTCTGCAGGGGGCGACCTCGGTGGCGGTGCGAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCCGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCTGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAACACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCCAGATCAGCCACAGCCACCGTGTCCCTGTTTGTCATGGATGAGAACGACAATGCCCCTTCCATTAGTTTCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACTGTGGTGGCTTCTGTAGTGGCAACCGACAGTGACAATGGGGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTTTAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTATGGGCTGCACCGACTAGTAGTGCAAGTGAATGATAGCGGGCAACCCCCCCAGTCGACAATAGCCCTGGTGCACGTGTTCGTCAATGAAACCATCTCCAATGCCACAGTGGTCGACTTCCAAATTGCCAGAAGTTTGCATACCCCATTAACCCAGGATATCGCTGGAGACCCCAGCTATGACATGAGCAAGCAGAGACTGAGCATAGTCATAGGAGTGGTGGCTGGCATCATGACTGTCATTCTGATCATACTGGTGGTGGTCATGGCCCGTTACTGTCGTGCCAAAAGCAAGAATGGCTACGAAGCCGGCAAAAAGGACCACGAGGACTTCTTCACCCCCCAGCAGCACGATAAGTC
consensus depths 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 4 4 4 4 4 4 4 4 4 4 4 4 3 4 3 4 3 4 3 4 3 4 3 4 3 4 3 4 3 4 3 4 3 4 3 4 3 4 2 4 2 4 1 3 2 3 2 3 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
BLH MIN 15 193
5 1 1 add Emb9 out IMAGE:7976096.5p CCTGGAGCCTCCTATGGACGGGATCTTCTCCATTCACCCCGACACCGGCGATATCACAGTCAATATCATCCTGGACCGGGAGCAGACGGACAGGTACGAGTTCAGAGTGGTCGCCAAAGACAAGGGCATCCCCGTCCTGCAGGGGGCGACCTCAGTGGTGGTGCAAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCAGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCAGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAGCACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCAAGATCAGCCACTGCCACCGTGTCCCTGTTTGTGATGGATGAGAATGACAATGCCCCTTCCATTAGTATCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACGGTGGTGGCCTCAGTAGTGGCAACCGACAGTGACAATGGAGTCAATGCTGATCTCACTACAGCATCGTAGGGGGGATCCCCTAAAGCTCTTCGAAATGACTCCCCCACGGAGTGGTTCTTTGGTTGCAACTCACCTTAAGCTTATGGCTGCACAATATAGTGCAGTGATGAACTGGCACCCTCAGTCACAAACCTGGTGCCTTTTCTCAGAACCTTCAAGCCATGGCACTCAATGCAGATTCTACCTTACAGATTCTGGCACCTTAATA
5 1 2 seed Em10 IMAGE:7982725.5p CAACAACTCCCTGACCGTCAAGACAAGGGCATCCCCGTTCTGCAGGGGGCGACCTCGGTGGCGGTGCGAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCCGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCTGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAACACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCCAGATCAGCCACAGCCACCGTGTCCCTGTTTGTCATGGATGAGAACGACAATGCCCCTTCCATTAGTTTCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACTGTGGTGGCTTCTGTAGTGGCAACCGACAGTGACAATGGGGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTTTAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTATGGGCTGCACCGGCTAGTAGTGCAAGTGGATGATAGCGGGCAACCCCCCCAGTCTACAGTAGCCCTGGTGCACGTGTTCCGTCATGAAACCATCTCCAACGCCACCGTGTTCGATTTCCCAATTGC
5 1 2 bld Em10 IMAGE:8318992.5p CACAACTCCCTGACCGTCAAGACAAGGGCATCCCCGTTCTGCAGGGGGCGACCTCGGTGGCGGTGCGAGTGGCCGACAGAAACGACAACGAGCCCAAGTTCATGCAGGACGTGTTCACTTTCTACGTGAAGGAAAACTTGCAGCCCAACAGCCCCGTGGGAATGGTGACCGTGATGGACTCGGACAAAGGTCGCAATGCTGAGATGAGTTTATTTATCGAGGAGGACAGCGATATCTTCTCCATAGAGAACGAAACGGGGACCATCTACTCCACCGTCTCCTTTGACAGGGAACACCAGACCAGCTACACGTTTAGGGTGAAAGCAGTAGATGGTGGAGACCCTCCCAGATCAGCCACAGCCACCGTGTCCCTGTTTGTCATGGATGAGAACGACAATGCCCCTTCCATTAGTTTCCCAATTAACACTTCCTATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACTGTGGTGGCTTCTGTAGTGGCAACCGACAGTGACAATGGGGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTTTAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTAGGGGCTGCACCGGCTATTAGTGCAAGTGAATGATAGCGGGCAACCCCCCCAGTCTCAGTAACCCTGGGGCACGTGTTCTTCAATGA
3 1 1 add Emb4 out IMAGE:4958923.3p TATGCTGTGCTGTCCCCTGCCAGCAACGTGAGAACGGTGGTGGCCTCAGTAGTGGCAACCGACAGTGACAATGGAGTCAATGCTGATCTCAACTACAGCATCGTAGGGGGGAATCCCTATAAGCTCTTCGAAATTGACTCCACCAGCGGAGTGGTGTCTTTGGTTGGCAAGCTCACCTCTAAGCATTATGGGCTGCACCGACTAGTAGTGCAAGTGAATGATAGCGGGCAACCCCCCCAGTCGACAATAGCCCTGGTGCACGTGTTCGTCAATGAAACCATCTCCAATGCCACAGTGGTCGACTTCCAAATTGCCAGAAGTTTGCATACCCCATTAACCCAGGATATCGCTGGAGACCCCAGCTATGACATGAGCAAGCAGAGACTGAGCATAGTCATAGGAGTGGTGGCTGGCATCATGACTGTCATTCTGATCATACTGGTGGTGGTCATGGCCCGTTACTGTCGTGCCAAAAGCAAGAATGGCTACGAAGCCGGCAAAAAGGACCACGAGGACTTCTTCACCCCCCAGCAGCACGATAAGTCT
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