Gurdon Institute Xenopus laevis EST Database
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Application in use by Guest User - 11 Apr 2021 - database INFO-PUBLIC
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By Clone or Sequence Name
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Related Clusters
CS% VC Transcript Size Type Links % In % Out Identified Blast Description.
11.3300000000000001 0Xl3.1-IMAGE:6878251.3.5 9 END 3 50 33 LTBP-1S protein [Xenopus laevis]
This cluster: approximate FL confidence score = 0%
1012796293 Xl3.1-IMAGE:6952664.5 - 6 ESTs
.....-320......-310......-300......-290......-280......-270......-260......-250......-240......-230......-220......-210......-200......-190......-180......-170......-160......-150......-140......-130......-120......-110......-100......-90.......-80.......-70.......-60.......-50.......-40.......-30.......-20.......-10.......0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980.......990.......1000......1010......1020......1030......1040......1050......1060......1070......1080......1090......1100......1110......1120......1130......1140......1150......1160......1170......1180......1190......1200......1210......1220......1230......1240......1250......1260......1270......1280......1290......1300......1310......1320......1330......1340......1350......1360......1370......1380......1390......1400......1410......1420......1430......1440......1450......1460......1470......1480......1490......1500......1510......1520......1530......1540......1550......1560......1570......1580......1590......1600......1610......1620......1630......1640......1650......1660......1670......1680.....
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Xl3.1-IMAGE:6952664.5 TATGCTTAAATGGGCTATGCCAAAACACTGATGGTTCATTTGTGTGCTCCTGCCATGAAGGCTATCAACTGGTGCCATCTGGGGATCAGTGCAATGACATTGATGAATGTCAAAATACAGACTTGTGCAGAAATGGACAATGCAGGAATACAAGGGGATCATTTACTTGCATATGTAATCAAGGTTATAAAGTATCTGCTGATGGAGAGCAATGTGAAGACATAGATGAATGCCAGGAAGAGGCTGAAGTCTGCCTTGGAGGGGGAAGCTGCCACAACGCTGATGGGTCATATGAATGCACTTGTCCAGATGGCTTCTTACTGGTAGATGGTATACGGTGTCAAGATATAAATGAGTGTGAACAGCCTGACCTTTGCACTCCTAATGGGGAATGTCTAAACACTGAGGGCTCATACCACTGCATCTGTGAACAAGGCTTTACTTCTTCAGCCAATGAAAGATCATGTGAAGACGTTGATGAATGTGCTAACACTACGCAGTGTGGCAGTCAAGGTATTTGTGAAAATACAGAAGGCTCCTATCGCTGCCTCTGTTACCAGGGTTATCAGGACTCCTTCGATGGGCAAGGGTGTGTGGATGTGAACGAGTGTGAAATGCTGAGCGGAGTATGCGGGGAGGCCCGATGCGAAAACGTGGAAGGCTCATTCCTCTGTCTGTGTGCTGACGAAAGCCAGGAATATGACCCTATGACAGGGTATTGCCGAAGCCACGATGTGCATGGCACCAACTCCTTTGGAGAGAGCAACAATGATAGTTTGCTTAATACTTTCAGTCCCAGTGTTACCCATGATAATACAGAGGAAAATGATGAAGATTACAAGGACTGCTACTATAATATCATTGGGGACAACTTCTGTCAGAATGTGTTGGCTGCCAACGTTAGCAAGCAAGAGTGTTGTTGTACATTAGGAGCTGGATGGGGAGATAATTGTGAGATCTTCCCATGTCCAGTCATAGGTTCTGATGAATTTACAGAAATGTGTCCAGAAGGAAAAGGCTACATACCATCAAAGGAGTCGATGTATGAGGGCAATGATATATCTTATCAAGATGCTGATGAGTGTATGTTGTTTGGAAAAGAAATCTGCAAAAATGGCTACTGCTTGAACACAGAGTCTAGTTATGAGTGCTACTGTAAGCAAGGCACATATTATGATCCTGTTAAGCTTCAGTGTATCGATAATAATGAATGTGAAGACCCAAGCAGCTGCATTGACGGCCAATGCATAAACAACGAGGGATCTTACAGCTGCTTCTGCACACACCCCATGATTC
Xl3.1-CHK-1012702120 TAAATGGGCTATGCCAAAACACTGATGGTTCATTTGTGTGCTCCTGCCATGAAGGCTATCAACTGGTGCCATCTGGGGATCAGTGCAATGACATTGATGAATGTCAAAATACAGACTTGTGCAGAAATGGACAATGCAGGAATACAAGGGGATCATTTACTTGCATATGTAATCAAGGTTATAAAGTATCTGCTGATGGAGAGCAATGTGAAGACATAGATGAATGCCAGGAAGAGGCTGAAGTCTGCCTTGGAGGGGGAAGCTGCCACAACGCTGATGGGTCATATGAATGCACTTGTCCAGATGGCTTCTTACTGGTAGATGGTATACGGTGTCAAGATATAAATGAGTGTGAACAGCCTGACCTTTGCACTCCTAATGGGGAATGTCTAAACACTGAGGGCTCATACCACTGCATCTGTGAACAAGGCTTTACTTCTTCAGCCAATGAAAGATCATGTGAAGACGTTGATGAATGTGCTAACACTACGCAGTGTGGCAGTCAAGGTATTTGTGAAAATACAGAAGGCTCCTATCGCTGCCTCTGTTACCAGGGTTATCAGGACTCCTTCGATGGGCAAGGGTGTGTGGATGTGAACGAGTGTGAAATGCTGAGCGGAGTATGCGGGGAGGCCCGATGCGAAAACGTGGAAGGCTCATTCCTCTGTCTGTGTGCTGACGAAAGCCAGGAATATGACCCTATGACAGGGTATTGCCGAAGCCACGATGTGCATGGCACCAACTCCTTTGGAGAGAGCAACAATGATAGTTTGCTTAATACTTTCAGTCCCAGTGTTACCCATGATAATACAGAGGAAAATGATGAAGATTACAAGGACTGCTACTATAATATCATTGGGGACAACTTCTGTCAGAATGTGTTGGCTGCCAACGTTAGCAAGCAAGAGTGTTGTTGTACATTAGGAGCTGGATGGGGAGATAATTGTGAGATCTTCCCATGTCCAGTCATAGGTTCTGATGAATTTACAGAAATGTGTCCAGAAGGAAAAGGCTACATACCATCAAAGGAGTCGATGTATGAGGGCAATGATATATCTTATCAAGATGCTGATGAGTGTATGTTGTTTGGAAAAGAAATCTGCAAAAATGGCTACTGCTTGAACACAGAGTCTAGTTATGAGTGCTACTGTAAGCAAGGCACATATTATGATCCTGTTAAGCTTCAGTGTATCGATAATAATGAATGTGAAGACCCAAGCAGCTGCATTGACGGCCAATGCATAAACAACGAGGGATCTTACAGCTGCTTCTGCACACACCCCATGATTCTCGATG
consensus depths 2 2 2 2 2 2 2 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 3 2 3 2 3 2 3 2 3 2 3 2 3 2 3 2 3 2 3 2 3 2 3 3 3 3 3 3 3 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 2 3 3 4 3 4 3 4 3 4 3 4 3 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 2 3 2 3 2 3 2 3 2 3 2 3
5 1 1 add Lu1 out IMAGE:4058444.5p GAATACTGTGAAAAAGGATTCCGCAAGAACCAAAGGGGTGAATGTGAAGATATTAACGAGTGTCTGAATGAATTATCTTGCCCACATGATAGATGTGTTAACAGTGTGGGCTCCTATGCTTGTGTTCCTTGTCCAGATGGATTCAATGGACTAAATGGACAGTGTTTTGACATCAATGAATGCCAGGAAGATACTTCACTGTGTGCCAATGGTGACTGCTCCAATCTAGAGGGATNCCTACAGGGTGCCACATGTCAAAGGGGATACGATGTAACCTCCGATGGCAAGGAATGTATAGATATAAATGAATGCCAGAGTGGAACGTTATGCTTAAATGGGCTATGCCAAAATACTGAAGGTTCATTTGTGTGCTCCTGCCATGAAGGCTATTAGC
5 1 1 add FaB IMAGE:8072890.5p GTCACAGGGGGTATGATGTAACCTCCGATGGCAAGCAATGTATAGATATAAATGAATGCCAGAGCAGCACTTTATGCTTAAATGGGCTATGCCAAAACACTGATGGTTCATTTGTGTGCTCCTGCCATGAAGGCTATCAACTGGTGCCATCTGGGGATCAGTGCAATGACATTGATGAATGTCAAAATACAGACTTGTGCAGAAATGGACAATGCAGGAATACAAGGGGATCATTTACTTGCATATGTAATCAAGGTTATAAAGTATCTGCTGATGGAGAGCAATGTGAAGACATAGATGAATGCCAGGAAGAGGCTGAAGTCTGCCTTGGAGGGGGAAGCTGCCACAACGCTGATGGGTCATATGAATGCACTTGTCCAGATGGCTTCTTACTGGTAGATGGTATACGGTGTCAAGATATAAATGAGTGTGAACAGCCTGACCTTTGCACTCCTAATGGGGAATGTCTAAACACTGAGGGCTCATACCACTGCATCTGTGAACAAGGCTTTACTTCTTCAGCCAATGGAAGATCATGTGAAGACGTTGATGAATGTGCTAACACTACGCAGTGTGGCAGTCAAGGTATTTGTGAAAATACAGATGGCTCCTATCGCTGCCTCTGTTACCAGGGTTATCAGGACTCCTTCGATGGGCAAGGGTGTGTGGATGTGAATGAGTGTGAGATGCTGAGCGGAGTTTGCGGGGAAGCACGATGCGAAAACGTGGAAGGCTCATTCTC
5 1 1 add FaBN out IMAGE:8075752.5p GCAATGCGAAGACATAGATGAATGCCAGGAAGGGGCTGAAGTCTGCCTTGGAGGGGGAAGCTGCCACAACACTGAAGGGTCATATGAATGCACTTGTCCAGATGGCTTCCTTCTGCTAGATGGTATACGGTGTCAAGATATAAATGAGTGTGAACAGCCTGAACTTTGCACTCCTAATGGAGAATGTCTCAACACTGAGGGCTCATACCACTGCATCTGTGAACAAGGCTTTACTACTTCAGCCAATGAAAGATCATGTGAAGACGTTGATGAATGTGCTAACACTACGCAGTGTGGCAGTCAAGGTATTTGTGAAAATACAGAAGGCTCCTATCGCTGCCTCTGTTACCAGGGTTATCAGGACTCCTTCGATGGGCAAGGGTGTGTGGATGTGAACGAGTGTGAAATGCTGAGCGGAGTATGCGGGGAGGCCCGATGCGAAAACGTGGAAGGCTCATTCCTCTGTCTGTGTGCTGACGAAAGCCAGGAATATGACCCTATGACAGGGTATTGCCGAAGCCACGATGTGCATGGCACCAACTCCTTTGGAGAGAGCAACAATGATAGTTTGCTTAATACTTTCAGTCCCAGTGTTACCCATGATAATACAGAGGAAAATGATGAAGATTACAAGGACTGCTACTATAATATCATTGGGGAACACTTCTGTCAGAATGTGTTGGCTGCCAACGTAGCAAGCAAGAGTGTTGTTGTACATTANGAGCTGGATGGGGAGATATTGTGAGATCTTCCATGTCCGTCATAGGTCTGATGATTAACGAAATGTGTCAGAAG
5 1 2 bld Brn1 IMAGE:6952664.5p ACAACACGGGAACCAGAACGAGCGCCGAACAACGCAAAGACCACAAGAAAACGAAAAAGGGGCAAAGCCGAAAACCGAACACAGAgggggggggggTGGAGCAGCTGGTACCGGTCCGATTCTCGGGATGCAGGTGTGTGGTGTGAACAGTGTGAATGCTGAGCGGAGTATGCGGGGAGGCCCGATGCGAAAACGTGGAAGGCTCATTCCTCTGTCTGTGTGCTGACGAAAGCCAGGAATATGACCCTATGACAGGGTATTGCCGAAGCCACGATGTGCATGGCACCAACTCCTTTGGAGAGAGCAACAATGATAGTTTGCTTAATACTTTCAGTCCCAGTGTTACCCATGATAATACAGAGGAAAATGATGAAGATTACAAGGACTGCTACTATAATATCATTGGGGACAACTTCTGTCAGAATGTGTTGGCTGCCAACGTTAGCAAGCAAGAGTGTTGTTGTACATTAGGAGCTGGATGGGGAGATAATTGTGAGATCTTCCCATGTCCAGTCATAGGTTCTGATGAATTTACAGAAATGTGTCCAGAAGGAAAAGGCTACATACCATCAAAGGAGTCGATGTATGAGGGCAATGATATATCTTATCAAGATGCTGACGAGTGTATGTTGTTTGGAAAAGAAATCTGCAAAAATGGCTACTGCTTGAACACAGAGTCTAGTTATGAGTGCTACTGTAAGCAAGGCACATATTATGATCCTGTTAAGCTTCAGTGTATCGATAATAATGAATGTGAAAGACCCCAAGCAGCCTGCATTTGGATGGGCCCAATGCCATAAAAACAAACCGAGGGGAATTCTTTTACAAGCCTGGCTTTTTGGCCACCACAACCCCCCCATTGAAATTCCCTTGGAATGGAAATTCAGGGaaaaaaaaGGGTGGTATTCCCCAGGCCCCCAAAAACCAAGGAGGGGATAACCAAAGTGGGAAGCCACAACCTTGGAAGGGACCCCCAGAATGGTTTTTACCCCAAAAGAACACTTTCCTGGGTTGGGGCCAAAAAAGCCTTGGAATTTGGGAAGGGAAAATTTTCGGTGGGGGGGTAAAACCCCCAAACCCCCTTTTTGGGGTTTTTGGGGaaaaaaaaaacttttaccctaaactttttttttttCCGCGGAAAAATGGTGCCCCTTCGCCACGGGGCCTTCTAA
5 1 2 seed Neu7 out XL033p15.5p GNCATGGCACCAACTCCTTTGGAGAGAGCAACAATGATAGTTTGCTTAATACTTTCAGTCCCAGTGTTACCCATGATAATACAGAGGAAAATGATGAAGATTACAAGGACTGCTACTATAATATCATTGGGGACAACTTCTGTCAGAATGTGTTGGCTGCCAACGTTAGCAAGCAAGAGTGTTGTTGTACATTAGGAGCTGGATGGGGAGATAATTGTGAGATCTTCCCATGTCCAGTCATAGGTTCTGATGAATTTACAGAAATGTGTCCAGAAGGAAAAGGCTACATACCATCAAAGGAGTCGATGTATGAGGGCAATGATATATCTTATCAAGATGCTGATGAGTGTATGTTGTTTGGAAAAGAAATCTGCAAAAATGGCTACTGCTTGAACACAGAGTCTAGTTATGAGTGCTACTGTAAGCAAGGCACATATTATGATCCTGTTAAGCTTCAGTGTATCGATAATAATGAATGTGAAGACCCAAGCAGCTGCATTGATGGCCAATGCATAAACAACGAGGGATCTTACAGCTGCTTCTGCACACACCCCATGATTCTTGATGAATCAGGAAAAAGGTGTATCCAGCCCAAACAAGAGGATACAAGTGAGCCAACTGAAGACACAGATGTTTACCAAGACTTC
5 1 2 bld Thy IMAGE:8547465.5p GTGTTGTTGTACATTAGGAGCTGGATGGGGAGATAACTGTGAGATCTATCCATGCCCAGTCATAGGTTCTGATGAATTTACAGGGATGTGTCCAGGAGGAAAAGGCTACATCCCATCAAAGGATTCCATGTATGAGGGCAATGATTTATCTTATCAAGATGCTGATGAGTGTATGTTGTTTGGAAAAGAAATCTGCAAAAATGGCTACTGCTTGAACACAGAGTCTAGTTATGAGTGCTACTGTAAGCAAGGCACATATTATGATCCTGTTAAGCTTCAGTGTATTGATAATAATGAATGTGAAGACCCAAGCAGCTGCATTGACGGCCAATGCATAAACAACGAGGGATCTTACAGCTGCTTCTGCACACACCCCATGATTCTCGATGAATCGGGAAAAAAGTGTATCCAGCAAGTGGATACAAGTGAGCCAACTGGAGACACAGATGTTTACCAAGATTTATGTTGGCAAGAGCTCAGTGAGGACTTTATGTGTAGCCAGCCTTTGGTTGGAAGACGTACTACTTATACAGAATGTTGCTGTTTATATGGAGAAGCATGGGGAATGCAATGTGCTTTTTGTCCTACCAAAGACTCAGAGGACTATGCAGAACTTTGCAACCTGCAGTACAGACGGCCTTATGGACACGATGCACTTATAGACCCTTACACATCTCACGATTCCGTTCCTTACGAGATTCCAGAACGTTATAGCTATGAAGAGCTGCGGGCAGAAGAGTGCGGCATCTTAAATGGATGTGAAAATGGAGGATGTT
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