Gurdon Institute Xenopus laevis EST Database
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Application in use by Guest User - 08 Aug 2022 - database INFO-PUBLIC
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By Clone or Sequence Name
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Related Clusters
CS% VC Transcript Size Type Links % In % Out Identified Blast Description.
1 1.0 0Xl3.1-XL454e14ex.5 6 END 1 33 16 hypothetical protein LOC780038 [Xenopus tropicalis]
This cluster: approximate FL confidence score = 0%
1012797043 Xl3.1-xlk150f04ex.3 - 3 ESTs
0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600...
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Xl3.1-xlk150f04ex.3 TATATATATATATATATATATATATAGGTATATATATATATATATATCTACGCAGCTGTCTGCATGTCCCTCTTGCCAAACTATATAGCAATCTTTTTATATCTGCCTTGTAGTAGCAGGTGCCCACCACACTGGGGCGCCCGAAGCACATCATTTTACAACAGCAAATTTGATTTGCTATTCTCCTTTCTTATATTTTTAGTCTTTTGTCTGTAGAAGTCGTCGTTGCATTTTGTTTGAACCAAGTGAAATAAGAACTCAGGGCATGTACGTGTGCAGCTATGACCTTCTGAGCCCACAGAGTATTTGTCGGTTCTTTATAAATAGATATAATGAGAAGTGAAAGTATCACGGTGGGCCGTCAGTCATTATCCATTATAAAGAGATATATCACCGTCAGTCTCTACTCGATATTACACCCTGTATTTCTGCTATCATCATATTTTCTGCAGGGAAATACTTGTCTGTCTCACTGAAGAGCCTAAACCATTCAAACCCAGGACAGGTTTCTTTTGTACGACCAATGCCAGAGTGAAATAAATCAAATGTCAATAAAACAGGATATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Xl3.1-CHK-1012711434 TATATATATATATATATATAGGTATATATATATATCTATATCTACGCAGCTGTCTGCATGTCCCTCTTGCCAAACTATATAGCAATCTTTTTATATCTGCCTTGTAGTAGCAGGTGCCCACCACACTGGGGCGCCCGAAGCACATCATTTTACAACAGCAAATTTGATTTGCTATTCTCCTTTCTTATATTTTTAGTCTTTTGTCTGTAGAAGTCGTCGTTGCATTTTGTTTGAACCAAGTGAAATAAGAACTCAGGGCATGTACGTGTGCAGCTATGACCTTCTGAGCCCACAGAGTATTTGTCGGTTCTTTATAAATAGATATAATGAGAAGTGAAAGTATCACGGTGGGCCGTCAGTCATTATCCATTATAAAGAGATATATCACCGTCAGTCTCTACTCGATATTACACCCTGTATTTCTGCTATCATCATATTTTCTGCAGGGAAATACTTGTCTGTCTCACTGAAGAGCCTAAACCATTCAAACCCAGGACAGGTTTCTTTTGTACGACCAATGCCAGAGTGAAATAAATCAAATGTCAATAAAACAGGATATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
consensus depths 1 1 1 1 1 1 2 3 2 3 2 3 2 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 2 1 2 1 2 1 1
Xl3.1-xlk150f04ex.3 TAG------------------------------------ATG---------------------------------------------------------------------------------------------------------------------------------------------------TAG---------------------TGA------TGA---------------------------------TGA---------------------------------------TAG---TAATGA------------------------------------------TAA------------------------------------------------------------------------------------------------------------------------------------------------------------TAA------------TAA
3 1 1 add Ov1 out IMAGE:5074799.3p TATATATATATATATATATATATATAGGTATATATATATATCTCTACGCAGCTGTCTGCATGTCCCTCTTGCCAAACTATATAGGTAGCAATCTTTTTATATCTGCCTTGTAGTAGCAGGTGCCCACCACACTGGGGCGCCCGAAGCACATCATTTTACAACAGCAAATTTGATTTGCTATTCTCCTTTCTTAGATTTTTAGTCTTTTGTCTGTAGAAGTCGTCGTTGCATTTTGTTTGAACCAAGTGAAATAAGAACTCAGGGCATGTACGTGTGCAGCTATGACCTTTTGAGCCCACAGAGTATTTGTCGGTTCTTTATAAATAGATATAATGAGAAGTGAAAGTATCCCGGTGGGCCGTCAGTCATTATCCATTATAAAGAGATATATCCCTGTCAGTCTCTACTCGATATTACACCCTGTATTTCTGCTATCATCATATTTTCTGCAGGGAAATACTTGTCTGTCTCACTGAAGAGCCTAAACCATTCAAACCCAGGACAGGTTTCTTTTGTACGACCAATGCCAGAGTGAAATAAATCAAATGTCAATAAAACAGGATATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
5 1 2 bld Ga18 in xlk150f04ex.5p tatatatatatatatCTACGCAGCTGTCTNCATGTCCCTCTTGCCAAACTATATAGCAATCTTTTTATATCTGCCTTGTAGTAGCAGGTNNCCACCACACTGGGGCGCCCGAAGCACATCATTTTACAACAGCAAATTTGATTTGCTATTCTCCTTTCTTATATTTTTAGTCTTTTGTCTGTAGAAGTCGTCGTTGCATTTTGTTTGAACCAAGTGAAATAAGAACTCAGGGCATGTACGTGTGCAGCTATGACCTTCTGAGCCCACAGAGTATTTGTCGGTTCTTTATAAATAGATATAATGAGAAGTGAAAGTATCACGGTGGGCCGTCAGTCATTATCCATTATAAAGAGATATATCACCGTCAGTCTCTACTCGATATTACACCCTGTATTTCTGCTATCATCATATTTTCTGCAGGGAAATACTTGTCTGTCTCACTGAAGAGCCTAAACCATTCAAACCCAGGACAGGTTTCTTTTGTACGACCAATGCCAGAGTGAAATAAATCAAATGTCAATAAAACAGGATATTTTCAAGTGATGTTTTTaaaaaaaaaa
3 1 2 seed Ga18 in xlk150f04ex.3p TATATATATATATATCTACGCAGCTGTCTGCATGTCCCTCTTGCCAAACTATATAGCAATCTTTTTATATCTGCCTTGTAGTAGCAGGTGCCCACCACACTGGGGCGCCCGAAGCACATCATTTTACAACAGCAAATTTGATTTGCTATTCTCCTTTCTTATATTTTTAGTCTTTTGTCTGTAGAAGTCGTCGTTGCATTTTGTTTGAACCAAGTGAAATAAGAACTCAGGGCATGTACGTGTGCAGCTATGACCTTCTGAGCCCACAGAGTATTTGTCGGTTCTTTATAAATAGATATAATGAGAAGTGAAAGTATCACGGTGGGCCGTCAGTCATTATCCATTATAAAGAGATATATCACCGTCAGTCTCTACTCGATATTACACCCTGTATTTCTGCTATCATCATATTTTCTGCAGGGAAATACTTGTCTGTCTCACTGAAGAGCCTAAACCATTCAAACCCAGGACAGGTTTCTTTTGTACGACCAATGCCAGAGTGAAATAANTCAAATGTCAATAANNC
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