Gurdon Institute Xenopus laevis EST Database

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 Related Clusters

         CS%  VC Transcript                               Size Type    Links    % In    % Out     Identified Blast Description.
     1   2.0    0Xl3.1-XL515k07ex.3                          5 END     2         100       40                (no blast hit)

 This cluster: approximate FL confidence score = 41%

 1012797290 Xl3.1-XL013g23.5 - 2 ESTs
                                                                       0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......
 ?   ?   ?    ?    ?     ?    ?   ? 
                                                      Xl3.1-XL013g23.5 GCTGAGACTGAGTGTAACGTGGAGGTTGGAGCCGGACTGTCCTGTGTCTCCTTTCACTTTCACAGCGGCCGGACCTGCAGCCTGAGATCTGTCACGTGTGCAGGGGAGTCGGGCCTCTCAGAGAGTGCGGGGAGTGCAGGGGAGCAGCTTCTGGGTAGGAGCGTGCTAGAGAAGACCTCAGGTGTGGGCGAATCGTGGGTTGGAGGGTGCTCACTGCTCAGTGATGTGAGTTCTGGATCTAACCTCGGACTGGCATTAAAAAAAAGATACTGACTCTAATGGAATAATCGTTGGCGCCAGACTGAGGGGCGCAGGTTTATGTGGCACAAGGGTAGTCTATGGGACTGTGTGGATAAAGCAGCTCACAGTAGTGAGTGTAGGGTTAATACTAACTGTAACTTTAGCGCGGCGTGTGTAGCGCAGAGTCAGTGCAGAGTCAGTGGAGCTTGTGTGCCTTACTATAAATCGGGGCACTGGGATATACAGACGGGTCAGTACATTTACCTGCTATTTATTCAAGGGATTATAGGGGCACAGGGTGTAGTGGATCAACTCTACAATGGAGCTGAATGGTCCCCCAAGTTCCCAGGTTCCTCATACCCCCACTTCTGCTCCATCACTTCCAATCACCGTGGCAGGTACTCTCCTGCGTGGCCCCCAGTTGCTGCTCCG
                                                  Xl3.1-CHK-1012717958       ACTGAGTGTAACGTGGAGGTTGGAGCCGGACTGTCCTGTGTCTCCTTTCACTTTCACAGCGGCCGGACCTGCAGCCTGAGATCTGTCACGTGTGCAGGGGAGTCGGGCCTCTCAGAGAGTGCGGGGAGTGCAGGGGAGCAGCTTCTGGGTAGGAGCGTGCTAGAGAAGACCTCAGGTGTGGGCGAATCGTGGGTTGGAGGGTGCTCACTGCTCAGTGATGTGAGTTCTGGATCTAACCTCGGACTGGCATTAAAAAAAAGATACTGACTCTAATGGAATAATCGTTGGCGCCAGACTGAGGGGCGCAGGTTTATGTGGCACAAGGGTAGTCTATGGGACTGTGTGGATAAAGCAGCTCACAGTAGTGAGTGTAGGGTTAATACTAACTGTAACTTTAGCGCGGCGTGTGTAGCGCAGAGTCAGTGCAGAGTCAGTGGAGCTTGTGTGCCTTACTATAAATCGGGGCACTGGGATATACAGACGGGTCAGTACATTTACCTGCTATTTATTCAAGGGATTATAGGGGCACAGGGTGTAGTGGATCAACTCTACAATGGAGCTGAATGGTCCCCCAAGTTCCCAGGTTCCTCATACCCCCACTTCTGCTCCATCACTTCCAATCACCGTGGCAGGTACTCTCCTGCGTGGCCCCCAGTTGCTGCTCCGCGCCGC
                                                      consensus depths      1     1     1     1     1     1     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1
                                               ORF LNG     318       2 
                                                      Xl3.1-XL013g23.5                                                                                                                                                                                                                                                                               TGA---TAA---------------------------------------ATG
                                                                   ORF                                                                                                                                                                                                                                                                                                                               [ open reading frame                                                                                                                                                                                                                                                                                                                                            ...
  5   1   2       bld Tbd7 5g3  out                        XL077j02.5p GCTGAGACTGAGTGTAACGTGGAGGTTGGAGCCGGACTGTCCTGTGTCTCCTTTCACTTTCACAGCGGCCGGACCTGCAGCCTGAGATCTGTCACGTGTGCAGGGGAGTCGGGCCTCTCAGAGAGTGCGGGGAGTGCAGGGGAGCAGCTTCTGGGTAGGAGCGTGCTAGAGAAGACCTCAGGTGTGGGCGAATCGTGGGTTGGAGGGTGCTCACTGCTCAGTGATGTGAGTTCTGGATCTAACCTCGGACTGGCATTaaaaaaaaGATACTGACTCTAATGGAATAATCGTTGGCGCCAGACTGAGGGGCGCAGGTTTATGTGGCACAAGGGTAGTCTATGGGACTGTGTGGATAAAGCAGCTCACAGTAGTGAGTGTAGGGTTAATACTAACTGTAACTTTAGCGCGGCGTGTGTAGCGCAGAGTCAGTGCAGAGTCAGTGGAGCTTGTGTGCCTTACTATAAATCGGGGCACTGGGATATACAGACGGGTCAGTACATTTACCTGCTATTTATTCAAGGGATTATAGGGGCACAGGGTGTAGTGGATCAACTCTACAATGGAGCTGAATGGTCCCCCAAGTTCCCAGGTTCCTCATACCCCCACTTCTGCTCCATCACTTCCAATCACCGTGGCAGGTACTCTCCTGCGTGGCCCCCAGTTGCTGCTCCGCGCCGCAG
  5   1   2      seed Neu7 5g3  out                        XL013g23.5p                           TGGAGCCGGACTGTCCTGTGTCTCCTTTCACTTTCACAGCGGCCGGACCTGCAGCCTGAGATCTGTCACGTGTGCAGGGGAGTCGGGCCTCTCAGAGAGTGCGGGGAGTGCAGGGGAGCAGCTTCTGGGTAGGAGCGTGCTAGAGAAGACCTCAGGTGTGGGCGAATCGTGGGTTGGAGGGTGCTCACTGCTCAGTGATGTGAGTTCTGGATCTAACCTCGGACTGGCATTaaaaaaaaGATACTGACTCTAATGGAATAATCGTTGGCGCCAGACTGAGGGGCGCAGGTTTATGTGGCACAAGGGTAGTCTATGGGACTGTGTGGATAAAGCAGCTCACAGTAGTGAGTGTAGGGTTAATACTAACTGTAACTTTAGCGCGGCGTGTGTAGCGCAGAGTCAGTGCAGAGTCAGTGGAGCTTGTGTGCCTTAC

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