Gurdon Institute Xenopus laevis EST Database

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 Related Clusters

         CS%  VC Transcript                               Size Type    Links    % In    % Out     Identified Blast Description.
     1   2.0    0Xl3.1-PBX0113D10.5                          6 END     1          25       16                (no blast hit)

 This cluster: approximate FL confidence score = 0%

 1012799701 Xl3.1-IMAGE:6862931.5 - 4 ESTs
                                                                       .......-80.......-70.......-60.......-50.......-40.......-30.......-20.......-10.......0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580
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                                                 Xl3.1-IMAGE:6862931.5                                                                                        AGAGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTATCAGAGTATATATCGAATCCAATAAATGATTCTTTACATAAGTAATCTATCCCAATCCCCACCTCTCCTTAGTTTGGGCACCATGTCTATTCCCATAAATTTAGGTAGGCAACCTATGATCCATTGTCATAAAATGTTTGTTCAATGATATATCTGATCTCCCTGTCTCAAATGCTTTCTTAATTGAGGACCTATGGTTACCCATTCATTCACAAACCATATTCTGAGCCATACCTACCTACATCAAGCCACATGGGCATGTGATCATATAAATTACGTGTAGTTGTACATATTATTCGATGGTTGATGGGAATACTCTTGCCAGAATGGAGATGGTGAAAAGTAGTAACTGTTTGCATATTACGACATGTGGTACAATACTATATATATATATCAGGTGGCAGTTAATATTATGTTATAGAATTGTGAAAGTAAACTGTTCATACCCCCAAAAAAA
                                                  Xl3.1-CHK-1012708733                                                                                              TGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTATCAGAGTATATATCGAATCCAATAAATGATTCTTTACATAAGTAATCTATCCCAATCCCCACCTCTCCTTAGTTTGGGCACCATGTCTATTCCCATAAATTTAGGTAGGCAACCTATGATCCATTGTCATAAAATGTTTGTTCAATGATATATCTGATCTCCCTGTCTCAAATGCTTTCTTAATTGAGGACCTATGGTTACCCATTCATTCACAAACCATATTCTGAGCCATACCTACCTACATCAAGCCACATGGGCATGTGATCATATAAATTACGTGTAGTTGTACATATTATTCGATGGTTGATGGGAATACTCTTGCCAGAATGGAGATGGTGAAAAGTAGTAACTGTTTGCATATTACGACATGTGGTACAATACTATATATATATATCAGGTGGCAGTTAATATTATGTTATAGAATTGTGAAAGTAAACTGTTCATACCCCCA
                                                      consensus depths                                                                                             1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     4     4     4     4     4     4     4     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     3     4     2     4     2     4     2     4     2     4     2     3     2     2     2     2     1     1
                                                                       PREDICTED - Hs ---- 9e-007     XP_001719409.1 PREDICTED: hypothetical protein, partial [Homo sapiens] ====================================================================================================================================================================================================================================================================================================================================================================================
                                                 Xl3.1-IMAGE:6862931.5                                                                                                                                                                                                             TAAATG------------------------------------------------------ATG------------------------------ATG---------------ATG---------TGA------TGA---------------------------TGA------ATG------------------------------------------------------------------------------------TAG---------------------TGA------------------------------------TAGTAA------------------ATG------------------------------------------ATG---TAG
                                                                   ORF                                                                                                                                                                                                                ... open reading frame                                                                                                 ]
  3   1   2      skin Ga18      out                     xlk138j20ex.3p                                                                            GTGCNCGNTATCAGAGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTATCAGAGTATATATCGAATCCAATAAATGATTCTTTACATAAGTAATCTATCCCAATCCCCACCTCTCCTTAGTTTGGGCACCATGTCTATTCCCATAAATTTAGGTAGGCAACCTATGATCCATTGTCATAAAATGTTTGTTCAATGATATATCTGATCTCCCTGTCTCAAATGCTTTCTTAATTGAGGACCTATGGTTACCCATTCATTCACAAACCATATTCTGAGCCATACCTACCTACATCNNNNACATGGGCATGTGATCATATAAATTACGTGTAGTTGTACATATTATTCGATGGTTGATGGGAATACTCTTGCCAGAATGGAGATGGTGAAAAGTAGTAACTGTTTGCATATTACGACATGTGGTACAATACTATATATATATATCAGGTGGCAGTTAATATTANNTTATAGA
  5   1   2      seed Emb1                            IMAGE:6862931.5p                                                                                                                                                                                                                             TAAGTAATCTATCCCAATCCCCACCTCTCCTTAGTTTGGGCACCATGTCTATTCCCATAAATTTAGGTAGGCAACCTATGATCCATTGTCATAAAATGTTTGTTCAATGATATATCTGATCTCCCTGTCTCAAATGCTTTCTTAATTGAGGACCTATGGTTACCCATTCATTCACAAACCATATTCTGAGCCATACCTACCTACATCAAGCCACATGGGCATGTGATCATATAAATTACGTGTAGTTGTACATATTATTCGATGGTTGATGGGAATACTCTTGCCAGAATGGAGATGGTGAAAAGTAGTAACTGTTTGCATATTACGACATGTGGTACAATACtatatatatatatCAGGTGGCAGTTAATATTATGTTATAGAATTGTGAAAGTAAACTGTTCATACCCCANaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGG
  5   1   2       bld Ga15      in                       XL497b15ex.5p                                                                                                                                                                                                                                                                                                                                                                                        ATGGTTACCCATTCGTTCACAAACCATATTCTGAGCCATACCTACCTACATCAAGCCACATGGGCATGTGATCATATAAATTACGTGTAGTTGTACATATTATTCGATGGTTGATGGGAATACTCTTGCCAGAATGGAGATGGTGAAAAGTAGTAACTGTTTGCATATTACGACATGTGGTACAATACtatatatatatatCAGGTGGCAGTTAATATTATGTTATAGAATTGTGAAAGTAAACTGTTCATACCCCCaaaaaaaaaa
  3   1   2       bld Ga15      in                       XL497b15ex.3p                                                                                                                                                                                                                                                                                                                                                                                        ATGGTTACCCATTCGTTCACAAACCATATTNTGAGCCATACCTACCTACATCAAGCCACATGGGCATGTGATCATATAAATTACGTGTAGTTGTACATATTATTCGATGGTTGATGGGAATACTCTTGCCAGAATGGAGATGGTGAAAAGTAGTAACTGTTTGCATATTACGAGCATGTGGTACAATACTATATATATATATCAGGTGGCAGTTAATATTA

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