Gurdon Institute Xenopus laevis EST Database
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Application in use by Guest User - 07 Mar 2021 - database INFO-PUBLIC
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By Clone or Sequence Name
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Related Clusters
CS% VC Transcript Size Type Links % In % Out Identified Blast Description.
1 2.0 0Xl3.1-XL435e15ex.5 9 END 2 50 22 Vav2 oncogene [Xenopus laevis]
2 1.0 0Xl3.1-IMAGE:7975055.3 2 END 1 25 50 Vav2 oncogene [Xenopus laevis]
This cluster: approximate FL confidence score = 0%
1012801275 Xl3.1-xlk5d09ex.5 - 4 ESTs
0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980.......990.......1000......1010......1020......1030......1040......1050......1060......1070......1080......1090......1100......1110......1120......1130......1140......1150......1160......1170......1180......1190......1200......1210......1220......1230......1240......1250......1260......1270......1280......1290......1300......1310......1320......1330......1340......1350......1360......1370......1380......1390......1400......1410......1420......1430......1440......1450......1460......1470......1480......1490......1500......1510......1520......1530......1540......1550......1560......1570......1580......1590......1600......1610......1620......1630......1640......1650......1660......1670......1680......1690......1700......1710......1720......1730......1740......1750......1760......1770......1780......1790......1800......1810......1820
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Xl3.1-xlk5d09ex.5 TGNCCTCTTCGACCCCTNCGACTTGTTTGATGTCCGGGATTTTGGAAAGGTGATTGCCGCTTTGTCCAAGATTTCCTACCACAACATTGCCCAAACCAAGGGAATTCGGCCTTTCCCTTCGGAAGACACGACAGAGAACGATGACGACATATACAGAAGCCTGGAGGAGCTTGCCGATGAGCATGACCTTGGGGAGAACGATACGTACGACGTCCCGTGTGAAGAGGATGATATTTATGAAGACATCATCAAAGTTGAAAACCAGCAACCGATGAAAATGGGCATGACGGAGGACGACAAAAGGAATTGCTGCTTACTGGAGATTCGGGAAACAGAAGATCGGTATTACAGAACGTTGGAGGATATTAAGAATTACTACACGATCCCCCTGAAGCAGATACTGAGTGTACAGGAGATCACAAACATATTCCTCAATTTAGAGGAACTCATCAAGGTGCATTTTAACTTCCTTCGGACCATCGAGCTGTCAGTCATGTCGGGGGGCAGTTCTATTGGGCAGGTGTTCCTGGATTACAAGGAAAAACTACTCATCTATGGGGACTACTGCAGCCATATTGAGTATTGCCAGAAGACCCTGGACCAGCTTATAGCAACCCGTGAAGATGTGCGGACTAAATTAGAGGAATGTTCTCTCAAGGTTCAGGAGGGAAAGTTCAAACTGCAAGATTTGCTGGTGATCCCCATGCAGAGAGTCCTGAAGTACCATCTCCTACTCAAAGAACTTCTCAGCCACACAGCAGACAGCCCAGAGAGACATACGCTTAAGGAAGCTCTGGATGCCATGCAGGACCTTGCAATGTACATCAATGAAGTGAAACGGGATAAGGAAACGTTAAAGAAGATTAGCGAGTTCCAGAATTCCATAGAAAACTTGCAAGTCAACCTGGAAGAATTCGGGCGACCAAAGATAGACGGGGAGTTAAAAGTTCGTTCCATGGTTAACCAGGCCAAACAGGATAGGTATCTCTTCCTGTTTGACAAAGTAGTGATTGTCTGCAAAAGGAGAGGCTACAACTACGAACTGAAGGAAATCATCGAGCTGCTGTGTCACAAGATGAACGACGACCCCATGAACAACAAAGACATAAAAAAGTGGTCCTATGGGTTCTTCCTTATCCATCTCCAAGGCAAGCAGGGGTTCCAGTTTTTTTGCAAGACAGAAGATATGAAGAGGAAGTGGATGGAGCAGTTCGAAATGGCAATGTCAAACATAAAGCCCGAAAAGGCCACCGCCAACCACCACAACTTCCAGATGTTTACATTCGACAAAACCACCAACTGCAAAGCCTGCAAGATGTTCCTGAGGGGCACTTTTTACCAGGGATATTTTTGTTCTCGGTGCGGCGTTGGGGTCCACAAGGAGTGCCTGGAAACCATTCATGCCTGCAAAACCGGTGGGTCTACGGATGACGTGGATGCTCTTATCACAGTATCAGGGCCTAAAATGGTTGCGGTACAGAACTACTTCGGAAACCCAGCACCTCCGGGGAAACCCGTATTAACCTTTCAGAAAGATGACCTGATCGAGTTGCTGCGGGGCAACCCGAATTCTCAATGGTGGGAGGGGCGGTTGCTGCTCACTAAGAAGTCTGGTTATTTCCCAAGTGCTTCGGTGGAGCCGTGTCCTGTGGAACCACTTGTGATCCGCACCGATTACAATAAATACCCTTGGTTCGCTGGGAATGTGGAGAGACCGCAAGCGGACAACCTGCTCAAAGGCCACGTCAGCGGGACCTACCTGATCCGAGAGAGGCCGGCAGAGGCGGAACGATTCGCCATCAGCATTAAATT
Xl3.1-CHK-1012706295 CTTCGACCCCTNCGACTTGTTTGATGTCCGGGATTTTGGAAAGGTGATTGCCGCTTTGTCCAAGATTTCCTACCACAACATTGCCCAAACCAAGGGAATTCGGCCTTTCCCTTCGGAAGACACGACAGAGAACGATGACGACATATACAGAAGCCTGGAGGAGCTTGCCGATGAGCATGACCTTGGGGAGAACGATACGTACGACGTCCCGTGTGAAGAGGATGATATTTATGAAGACATCATCAAAGTTGAAAACCAGCAACCGATGAAAATGGGCATGACGGAGGACGACAAAAGGAATTGCTGCTTACTGGAGATTCGGGAAACAGAAGATCGGTATTACAGAACGTTGGAGGATATTAAGAATTACTACACGATCCCCCTGAAGCAGATACTGAGTGTACAGGAGATCACAAACATATTCCTCAATTTAGAGGAACTCATCAAGGTGCATTTTAACTTCCTTCGGACCATCGAGCTGTCAGTCATGTCGGGGGGCAGTTCTATTGGGCAGGTGTTCCTGGATTACAAGGAAAAACTACTCATCTATGGGGACTACTGCAGCCATATTGAGTATTGCCAGAAGACCCTGGACCAGCTTATAGCAACCCGTGAAGATGTGCGGACTAAATTAGAGGAATGTTCTCTCAAGGTTCAGGAGGGAAAGTTCAAACTGCAAGATTTGCTGGTGATCCCCATGCAGAGAGTCCTGAAGTACCATCTCCTACTCAAAGAACTTCTCAGCCACACAGCAGACAGCCCAGAGAGACATACGCTTAAGGAAGCTCTGGATGCCATGCAGGACCTTGCAATGTACATCAATGAAGTGAAACGGGATAAGGAAACGTTAAAGAAGATTAGCGAGTTCCAGAATTCCATAGAAAACTTGCAAGTCAACCTGGAAGAATTCGGGCGACCAAAGATAGACGGGGAGTTAAAAGTTCGTTCCATGGTTAACCAGGCCAAACAGGATAGGTATCTCTTCCTGTTTGACAAAGTAGTGATTGTCTGCAAAAGGAGAGGCTACAACTACGAACTGAAGGAAATCATCGAGCTGCTGTGTCACAAGATGAACGACGACCCCATGAACAACAAAGACATAAAAAAGTGGTCCTATGGGTTCTTCCTTATCCATCTCCAAGGCAAGCAGGGGTTCCAGTTTTTTTGCAAGACAGAAGATATGAAGAGGAAGTGGATGGAGCAGTTCGAAATGGCAATGTCAAACATAAAGCCCGAAAAGGCCACCGCCAACCACCACAACTTCCAGATGTTTACATTCGACAAAACCACCAACTGCAAAGCCTGCAAGATGTTCCTGAGGGGCACTTTTTACCAGGGATATTTTTGTTCTCGGTGCGGCGTTGGGGTCCACAAGGAGTGCCTGGAAACCATTCATGCCTGCAAAACCGGTGGGTCTACGGATGACGTGGATGCTCTTATCACAGTATCAGGGCCTAAAATGGTTGCGGTACAGAACTACTTCGGAAACCCAGCACCTCCGGGGAAACCCGTATTAACCTTTCAGAAAGATGACCTGATCGAGTTGCTGCGGGGCAACCCGAATTCTCAATGGTGGGAGGGGCGGTTGCTGCTCACTAAGAAGTCTGGTTATTTCCCAAGTGCTTCGGTGGAGCCGTGTCCTGTGGAACCACTTGTGATCCGCACCGATTACAATAAATACCCTTGGTTCGCTGGGAATGTGGAGAGACCGCAAGCGGACAACCTGCTCAAAGGCCACGTCAGCGGGACCTACCTGATCCGAGAGAGGCCGGCAGAGGCGGAACGATTCGCCATCAGCATTAAATTCATGAC
consensus depths 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 2 2 2 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 1 2 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
5 1 2 seed Ga18 out xlk5d09ex.5p TGNCCTCTTCGACCCCTNCGACTTGTTTGATGTCCGGGATTTTGGAAAGGTGATTGCCGCTTTGTCCAAGATTTCCTACCACAACATTGCCCAAACCAAGGGAATTCGGCCTTTCCCTTCGGAAGACACGACAGAGAACGATGACGACATATACAGAAGCCTGGAGGAGCTTGCCGATGAGCATGACCTTGGGGAGAACGATACGTACGACGTCCCGTGTGAAGAGGATGATATTTATGAAGACATCATCAAAGTTGAAAACCAGCAACCGATGAAAATGGGCATGACGGAGGACGACAAAAGGAATTGCTGCTTACTGGAGATTCGGGAAACAGAAGATCGGTATTACAGAACGTTGGAGGATATTAAGAATTACTACACGATCCCCCTGAAGCAGATACTGAGTGTACAGGAGATCACAAACATATTCCTCAATTTAGAGGAACTCATCAAGGTGCATTTTAACTTCCTTCGGACCATCGAGCTGTCTGTCATGTCTGGGGGTAGCACTATCGGGCAGGTGTTCCTGGATTATAAGGAAAAGCTGCTCATCTATGGGGAGTACTGCAGCCATATTGAGTATTCCCAGAAGACCCTGGACCAGCTTATAGCAACCCGTGAAGATGTGCGGACTAAATTAGAGGAATGTTCTCTCAAGGTTCAGGAGGGAAAGTTCAAACTGCAAGATTTGCTGGTGATCCCCATGCAGAGAGTNCTGAAGNACCATCTCCTACTCAAAGAACTTCTCAGCCACACAGCAGACAGCCCAGAGAGACAT
5 1 1 add FaB IMAGE:8073770.5p TCAGAAGACCAACAGAGAACGATGACGACATATACAGAAGCCTGGAGGAGCTTGCTGATGAGCACGACCTCGGGGAGAATGATACGTACGACGTCCCGTGTGAAGAGGATGATATTTACGAAGATATCATCAAGGTTGAAAACCAGCAACCGATGAAAATGGGCATGACGGAGGATGACAAAAGGAATTGCTGCTTACTGGAGATCCGGGAAACAGAAGATCGTTATTACAGAACGTTGGAGGATATTAAGAATTACTACATGATCCCCCTGAAGCAGATACTGAGTGTGCAGGAGATCGCAAACATATTCCTTAATTTAGAGGATCTCATCAAGGTGCATTTTAACTTCCTTCGGACCATCGAGCTGTCAGTCATGTCGGGGGGCAGTTCTATTGGGCAGGTGTTCCTGGATTACAAGGAAAAACTACTCATCTATGGGGACTACTGCAGCCATATTGAGTATTGCCAGAAGACCCTGGACCAGCTTATAGCAACCCGTGAAGATGTGCGCACTAAACTGGAGGAATGTTCTCTCAAGGTACAGGAGGGAAAGTTCAAGCTGCAAGATTTGCTTGTGATCCCCATGCAGAGAGTCCTGAAGTATCATCTCCTACTCAAAGAACTTCTCAGCCACACAGCAGACAGCCCAGAGAGACATACGCTTAAGGGAGTCCTGGATGCCATGCAGGACCT
5 1 2 bld Ov1 out IMAGE:8329565.5p AGCAACCCGTGAAGATGTGCGGACTAAATTAGAGGAATGTTCTCTCAAGGTTCAGGAGGGAAAGTTCAAACTGCAAGATTTGCTGGTGATCCCCATGCAGAGAGTCCTGAAGTACCATCTCCTACTCAAAGAACTTCTCAGCCACACAGCAGACAGCCCAGAGAGACATACGCTTAAGGAAGCTCTGGATGCCATGCAGGACCTTGCAATGTACATCAATGAAGTGAAACGGGATAAGGAAACGTTAAAGAAGATTAGCGAGTTCCAGAATTCCATAGAAAACTTGCAAGTCAACCTGGAAGAATTCGGGCGACCAAAGATAGACGGGGAGTTAAAAGTTCGTTCCATGGTTAACCAGGCCAAACAGGATAGGTATCTCTTCCTGTTTGACAAAGTAGTGATTGTCTGCAAAAGGAGAGGCTACAACTACGAACTGAAGGAAATCATCGAGCTGCTGTGTCACAAGATGAACGACGACCCCATGAACAACAAAGACATAAAAAAGTGGTCCTATGGGTTCTTCCTTATCCATCTCCAAGGCAAGCAGGGGTTCCAGTTTTTTTGCAAGACAGAAGATATGAAGAGGAAGTGGATGGAGCAGTTTGATATGGCAATGTCAAACATAATGCCGAAAAAGCCTCTGCCAACCACCACAACTTCCAGATGTTTACATTCGACAAACCACCAACTGCA
5 1 1 add Spl out IMAGE:8463992.5p AAAAAGTGGTCTTATGGGTTCTTCCTGGTCCATCTCCAAGGCAAGCAGGGCTTTCAGTTTTTCTGTAAGACAGAGGAGATGAAGAGGAAGTGGATGGAGCAGTTCGAAATGGCAATGTCAAACATAAAGCCCGAAAAGGCCACCGCCAACCACCACAACTTCCAGATGTTTACATTCGACAAAACCACCAACTGCAAAGCCTGCAAGATGTTCCTGAGGGGCACTTTTTACCAGGGATATTTTTGTTCTCGGTGCGGCGTTGGGGTCCACAAGGAGTGCCTGGAAACCATTCATGCCTGCAAAACCGGTGGGTCTACGGATGACGTGGATGCTCTTATCACAGTATCAGGGCCTAAAATGGTTGCGGTACAGAACTACTTCGGAAACCCAGCACCTCCGGGGAAACCCGTATTAACCTTTCAGAAAGATGACCTGATCGAGTTGCTGCGGGGCAACCCGAATTCTCAATGGTGGGAGGGGCGGTTGCTGCTCACTAAGAAGTCTGGTTATTTCCCAAGTGCTTCGGTGGAGCCGTGTCCTGTGGAACCACTTGTGATCCGCACCGATTACAATAAATACCCTTGGTTCGCTGGGAATGTGGAGAGACCGCAAGCGGACAACCTGCTCAAAGGCCACGTCAGCGGGACCTACCTGATCCGAGAGAGGCCGGCAGAGGCGGAACGATTCGCCATCAGCATTAAATTCATGACGAG
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