Gurdon Institute Xenopus tropicalis EST Database |
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+ | Application in use by Guest User - 28 Feb 2021 - database INFO-PUBLIC | = |
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![]() | Estimated expression levels relative to total library clones. |
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![]() | ![]() | 0.01% | ![]() |
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![]() | Stage specific expression levels | ![]() | ![]() |
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![]() | Tissue specific expression levels | ![]() | ![]() |
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1 | 5 | 10 | 15 | 20 | 25 | 30 | 35 | 40 | 45 | 50 | 55 | 60 | ![]() | tissue | ![]() |
Bod | Bone | Brn | Eye | Fat | Hrt | Int | Kid | Liv | Lun | Mus | Ova | Ovi | Panc | Ski | Spl | Sto | Te | Thy |
Related Clusters (none)
This cluster: approximate FL confidence score = 0% 1012082981 Xt7.1-XZT29097.5 - 9 ESTs .......-40.......-30.......-20.......-10.......0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640. ? ? ? ? ? ? ? ? Xt7.1-XZT29097.5 GAAGCAGCCATTTCTGACACGGAGGCGACAAAGGGAAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCATCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCACCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGGGGTTCTTAGAATAAAATCATTGGGA Xt7.1-CHK-1008237214 GCCATTTCTGACACGGAGGCGACAAAGGGAAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCATCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCACCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGGGGTTCTTAGAATAAAATCATTGGGATCTTTT consensus depths 3 3 5 5 5 5 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 9 8 8 7 8 7 7 SNP T----------- BLH MIN 127 12 EST CLI -12 1 PREDICTED - Mm ---- 5e-021 NP_001028630.1 hypothetical protein LOC381633 [Mus musculus] ----------------------------------------==================================================================================================================================================================================================================================== PREDICTED - Hs ---- 1e-021 XP_943061.1 PREDICTED: hypothetical protein [Homo sapiens] ------------------------------------------------------------------------------------------============================================================================================================================================================================================================================== PREDICTED - Dr ---- 7e-023 XP_695097.1 PREDICTED: hypothetical protein XP_690005 [Danio rerio] ========================================================================================================================================================= PREDICTED - Gg ---- 1e-026 XP_420837.2 PREDICTED: hypothetical protein [Gallus gallus] ============================================================================================================================================================================= Xt7.1-XZT29097.5 ATG---------------------------------ATG---------ATG------ATG------------ATG------------------------------------------------------------------------------------ATG------------------------------------------------------------------------------------------------------------------------TGA---------------------------------TAA---------------------------------------------------------------------------TAA---------ATG------------------------------------------------ATG---ATG------------------TAAATG------------TAA ORF ... open reading frame ] 3 1 2 seed Tad5 in XZT29097.3p CCACGCGTCCGGCCTGAAGCAGCCATTTCTGACACGGAGGCGACAAAGGGAAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCATCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCACCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGGGGTTCTTAGAATAAAATCATTGGGATCTTTTT 5 1 2 bld TpA TTpA002k07.p1kSP6 TGGTTCCAGCCTGAAGCAGCCATTTCTGACACGGAGGCGACAAAGGGAAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCATCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCACCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGGGGTTCTTAGAATAAAATCATTGGGATC 5 1 2 bld Tad5 in XZT29097.5p GCCTGAAGCAGCCATTTCTGACACGGAGGCGACAAAGGGAAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCATCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCACCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGGGGTTCTTAGAATAAAATCATTGGGATCTTTTTAAGAAAAAAAAAAAAAAAGG 3 1 2 bld BrSp in EC2BBA19AE04.b1 GGGGATTTCTGACACGGAGGCGACAAAGGGAAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCTTCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCATCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGG 5 1 2 bld BrSp in EC2BBA19AE04.g1 GGGATTTCTGACACGGAGGCGACAAAGGGAAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCTTCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCATCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGGGGTTCTTAGAATAAAATCATTGGGATCTTTTTTGAAAAAAAAAAAAAAAAAAAA 3 1 2 bld BrSp in EC2BBA26CC09.b1 GGGGAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCTTCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCACCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGAAAAGAGCATGTCTGCGTGCAAGAATTTCTAAATGGGGAAAATAGAATAAAATC 5 1 2 bld BrSp in EC2BBA26CC09.g1 GGGAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCTTCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCACCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGGGGTTCTTAGAATAAAATCATTGGGATCTTTTTA 5 1 2 bld Brn4 CAAL23601.5p GGAAAGGAGAGAGGGAGAGAGACGGGCATTATCAGCTGCGCTGATCTATAGATACCAGGCAATGCCTTCCAGAAGCACATCAAGGTGCATCTACTCCATGCTCTTCCTCATGCTAACGATGGGGCTGCCGTTCATGAAGCTGGTCTTAGCAGATGAACCATCTGGAACAACTATTCCCCCAGAAAGTCGCCCCTGTGTCGATTGCCATGCGTTTGAATTCATGCAAAGAGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCACCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGGGGTTCTTAGAATAAAATCATTGGGATCTTTTTNAAAAAAAAAAAAAAAAAAAAAAAA 5 1 2 bld BrSp EC2BBA10DC06.g1 GGCACTCCAAGACCTCAAAAAGACAGCGTACAACCTAGACTCACGGACGGAGACCCTTCTGCTTAAGGTGGAGCGGAGAAGCCTGTGCGACTGCATCACCGCCGAGGGCTTGAGCTGAACATCTCCCACCTGTGACAAGGACATTCTCCCTTAACCCTTCTGCTGCTGGAAAGAGATTACGGCACATTGCTCCGGAGTGTCTGGCAGGTTCTGTTGGCAGCAAAAGGGTTAAACACCGACCATGCCACGAACATCGATTCCACCCGACACCGTATATCACCTTGACACTGTAATGTGCATGTCTGCGTGCAAGAATTTCTAAATGGGGTTCTTAGAATAAAATCATTGGGATCTTTCTAAAAAAAAAAAAAAAAAAAA
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