Gurdon Institute Xenopus tropicalis EST Database

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Estimated expression levels relative to total library clones.
(detailed explanation)

0.01% 0.01%
Stage specific expression levels Tissue specific expression levels
stage 1 5 10 15 20 25 30 35 40 45 50 55 60tissue Bod Bone Brn Eye Fat Hrt Int Kid Liv Lun Mus Ova Ovi Panc Ski Spl Sto Te Thy

 Related Clusters

         CS%  VC Transcript                               Size Type    Links    % In    % Out     Identified Blast Description.
     1   1.5    0Xt7.1-TTpA034n24.5                          3 END     2          66      100                Unknown (protein for MGC:97549) [Xenopus tropicalis]

 This cluster: approximate FL confidence score = 0%

 1012110871 Xt7.1-TTpA034n24.3 - 3 ESTs
                                                                       -1000.....-990......-980......-970......-960......-950......-940......-930......-920......-910......-900......-890......-880......-870......-860......-850......-840......-830......-820......-810......-800......-790......-780......-770......-760......-750......-740......-730......-720......-710......-700......-690......-680......-670......-660......-650......-640......-630......-620......-610......-600......-590......-580......-570......-560......-550......-540......-530......-520......-510......-500......-490......-480......-470......-460......-450......-440......-430......-420......-410......-400......-390......-380......-370......-360......-350......-340......-330......-320......-310......-300......-290......-280......-270......-260......-250......-240......-230......-220......-210......-200......-190......-180......-170......-160......-150......-140......-130......-120......-110......-100......-90.......-80.......-70.......-60.......-50.......-40.......-30.......-20.......-10.......0.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840.......850.......860.......870.......880.......890.......900.......910.......920
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                                                    Xt7.1-TTpA034n24.3                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACAAAAACAATATGAAAGAACACAGACATGGGGAAAACTATCTTCCCCATGTAGAGGTAGTTGAAAAGGAAGATTATGTGACAGAAGGAGAGAACAGAAAAACAACTGGACAGGGAGATATTGCAGAGAGCAGGAAAACCAATGATGAACAGGATGAGATTCAGACACAAATTAGCAGCAGTCTTAAAAAAGGAAAATGGAGACTGTCCTCAAAGAAGGGTGCAACACAGGAATATGAAGAAGGCCATGTGGAATCCTCATGGGAAGCAGAGGGGACCTCTACCTGGAATCTCCTGACACCTAAAATGTATAGCAAGAAGGACAGGTTAGCTAAAAATGTAGAAGGAGAGAGTTATTGGAAGGAAAGAGAGCTGCAGAACATTCCAAAAATATAAGAAGGTCTTTTGATGCAAGATCATCGTTACAGGTATGGCATCTGTTATATGGGCCTGGGCCTTCTGCACATGGTGTTTTCAGTAATTTGGGTCACCATACCTAATAAACAAGAAATAAACCCAACAGGATTGTTTTGCCACCAATATGGATACGTGCAGCTTAGTTACCATCAAATACAAGGTCCTGTTTTATTATCAGAGAAAAAAAAATGATATCTGGTCTCTGGATAAGAGACCTCATACCTGTAGCCCATAACTGTGAATTGTAAATATTAATTTGAACATTAAACTGGTACTTCTAAAGCTTTTCCAGCAATGAACCCTGTAAAAAGCTGTACATTATTGGGACACTATGAGGAATTGTCCCCAAAATAATGAACTTCTCAGCTGTGTGACATTGAAAGGGACAAGAATCTGTTTGCTGTATTAAAGGTAAAGAGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
                                                  Xt7.1-CHK-1008249090                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACAATATGAAAGAACACAGACATGGGGAAAACTATCTTCCCCATGTAGAGGTAGTTGAAAAGGAAGATTATGTGACAGAAGGAGAGAACAGAAAAACAACTGGACAGGGAGATATTGCAGAGAGCAGGAAAACCAATGATGAACAGGATGAGATTCAGACACAAATTAGCAGCAGTCTTAAAAAAGGAAAATGGAGACTGTCCTCAAAGAAGGGTGCAACACAGGAATATGAAGAAGGCCATGTGGAATCCTCATGGGAAGCAGAGGGGACCTCTACCTGGAATCTCCTGACACCTAAAATGTATAGCAAGAAGGACAGGTTAGCTAAAAATGTAGAAGGAGAGAGTTATTGGAAGGAAAGAGAGCTGCAGAACATTCCAAAAATATAAGAAGGTCTTTTGATGCAAGATCATCGTTACAGGTATGGCATCTGTTATATGGGCCTGGGCCTTCTGCACATGGTGTTTTCAGTAATTTGGGTCACCATACCTAATAAACAAGAAATAAACCCAACAGGATTGTTTTGCCACCAATATGGATACGTGCAGCTTAGTTACCATCAAATACAAGGTCCTGTTTTATTATCAGAGAAAAAAAAATGATATCTGGTCTCTGGATAAGAGACCTCATACCTGTAGCCCATAACTGTGAATTGTAAATATTAATTTGAACATTAAACTGGTACTTCTAAAGCTTTTCCAGCAATGAACCCTGTAAAAAGCTGTACATTATTGGGACACTATGAGGAATTGTCCCCAAAATAATGAACTTCTCAGCTGTGTGACATTGAAAGGGACAAGAATCTGTTTGCTGTATTAAAGGTAAAGAGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACT
                                                      consensus depths                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     1     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     2     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     3     2     2     2     2     2     2     2     2     1     1     1     1     1     1
                                                                       ...PROTEIN --- Xl ---- 4e-049     P79928 P2Y PURINOCEPTOR 8 (P2Y8) [Xenopus laevis]  --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------===================================================================================================================================================================================================================================================================================================================================================================================================
                                                                       ...PROTEIN --- ?? ---- 4e-049     NP_001080343.1 purinergic receptor P2Y, G-protein coupled 4 [Xenopus laevis] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------===================================================================================================================================================================================================================================================================================================================================================================================================
                                                                       ...PROTEIN --- Xt ---- 1e-072     AAH91589.1 Unknown (protein for MGC:97549) [Xenopus tropicalis] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------======================================================================================================================================================================================================================================================================================================================================================================================================
                                                    Xt7.1-TTpA034n24.3                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATG------------------------------------------------------------------------------------TAA------------ATG---------------------------------ATG------------------ATG------------------------------------------------------------------------------------------------------------------------------------------TGA---------------TAA---------------TAG------------------------TAA---------TAA---------------------------ATG------------------------------------------------------TAATGA
                                                                   ORF                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ... open reading frame                                                                                                                                                                                                                                                                                                                                                                    ...
  3   1   2      seed TpA  FL   out                   TTpA034n24.q1kT7                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACAAAAACAATATGAAAGAACACAGACATGGGGAAAACTATCTTCCCCATGTAGAGGTAGTTGAAAAGGAAGATTATGTGACAGAAGGAGAGAACAGAAAAACAACTGGACAGGGAGATATTGCAGAGAGCAGGAAAACCAATGATGAACAGGATGAGATTCAGACACAAATTAGCAGCAGTCTTAAAAAAGGAAAATGGAGACTGTCCTCAAAGAAGGGTGCAACACAGGAATATGAAGAAGGCCATGTGGAATCCTCATGGGAAGCAGAGGGGACCTCTACCTGGAATCTCCTGACACCTAAAATGTATAGCAAGAAGGACAGGTTAGCTAAAAATGTAGAAGGAGAGAGTTATTGGAAGGAAAGAGAGCTGCAGAACATTCCAAAAATATAAGAAGGTCTTTTGATGCAAGATCATCGTTACAGGTATGGCATCTGTTATATGGGCCTGGGCCTTCTGCACATGGTGTTTTCAGTAATTTGGGTCACCATACCTAAtaaacaagaaataaacccaacaggattgttttgccaccaatatggatacgtgcagcttagttaccatcaaatacaaggtcctgttttattatCAGAGAAAAAAAAATGATATCTGGTCTCTGGATAAGAGACCTCATACCTGTAGCCCATAACTGTGAATTGTAAATATTAATTTGAACATTAAACTGGTACTTCTAAAGCTTTTCCAGCAATGAACCCTGTAAAAAGCTGTACATTATTGGGACACTATGAGGAATTGTCCCCAAAATAATGAACTTCTCAGCTGTGTGACATTGAAAGGGACAAGAATCTGTTTGCTGTATTAAAGGAAAGA
  3   1   1       add Neu0 5g3  out                    NISC_ng23a02.x1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTCAGTAATTGGGGTCCCCATCCTTAATAACCAAGAAATAACCCCACCAGGTTTGTTTTGCCCCCAATATGGATACGTGCAGTTTAGTTCCCATCAAATCCAGGGTCCTGTTTTTTTTTCAGAGAAAAAAAAATGATTTTTGGTTTTTGGATAAGAGCCCTTATCCCTGTAGCCCATAACTGTGAATTGTAAATATTAATTTGACCATTAAACTGGTATTTTTAAAGTTTTTCCAGCAATGACCCCTGTAAAAAGCTGTCCATTATTGGGCCCTTATGAGGAATTGTCCCCAAAATAATGAATTTTTCAGCTGTGTGCCATTGAAAGGGCCAAGAATTTGTTTGTTGTATTAAAGGTAAAGGGGGCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaG
  5   1   2       bld Tad5                                  XZT5932.5p                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTATTATCAGAGAAAAAAAAATGATATCTGGTCTCTGGATAAGAGACCTCATACCTGTAGCCCATAACTGTGAATTGTAAATATTAATTTGAACATTAAACTGGTACTTCTAAAGCTTTTCCAGCAATGAACCCTGTAAAAAGCTGTACATTATTGGGACACTATGAGGAATTGTCCCCAAAATAATGAACTTCTCAGCTGTGTGACATTGAAAGGGACAAGAATCTGTTTGCTGTATTAAAGGTAAAGAGGGCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCACTAAAC

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